Cluster: CGMR074231_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR074231
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_76815 | k141_76815_22 | 25659 | 27761 | - | 1.A.104.1.1 |
| TC | k141_76815 | k141_76815_23 | 27800 | 28945 | - | 3.A.6.2.1 |
| STP | k141_76815 | k141_76815_24 | 29118 | 29843 | - | CheZ |
| STP | k141_76815 | k141_76815_25 | 29850 | 30194 | - | Response_reg |
| TC | k141_76815 | k141_76815_26 | 30272 | 31312 | - | 1.A.30.1.1 |
| TC | k141_76815 | k141_76815_27 | 31313 | 32173 | - | 1.A.30.1.1 |
| pfam | k141_76815 | k141_76815_28 | 32388 | 32963 | - | 5-FTHF_cyc-lig |
| CAZyme | k141_76815 | k141_76815_29 | 33084 | 34946 | + | GH23 |
Gene ID: k141_76815_22
Type: TC
Location: 25659 - 27761 (-)
Type: TC
Location: 25659 - 27761 (-)
Gene ID: k141_76815_23
Type: TC
Location: 27800 - 28945 (-)
Type: TC
Location: 27800 - 28945 (-)
Gene ID: k141_76815_24
Type: STP
Location: 29118 - 29843 (-)
Type: STP
Location: 29118 - 29843 (-)
Gene ID: k141_76815_25
Type: STP
Location: 29850 - 30194 (-)
Type: STP
Location: 29850 - 30194 (-)
Gene ID: k141_76815_26
Type: TC
Location: 30272 - 31312 (-)
Type: TC
Location: 30272 - 31312 (-)
Gene ID: k141_76815_27
Type: TC
Location: 31313 - 32173 (-)
Type: TC
Location: 31313 - 32173 (-)
Gene ID: k141_76815_28
Type: pfam
Location: 32388 - 32963 (-)
Type: pfam
Location: 32388 - 32963 (-)
Gene ID: k141_76815_29
Type: CAZyme
Location: 33084 - 34946 (+)
Type: CAZyme
Location: 33084 - 34946 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Comamonas
Species
Comamonas denitrificans_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.