Cluster: CGMR074231_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR074231
- CGC Family ID: CGCFAM_00011
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_76815 | k141_76815_5 | 5451 | 6761 | - | 3.A.1.103.4 |
| TC | k141_76815 | k141_76815_6 | 6751 | 7524 | - | 3.A.1.103.5 |
| pfam | k141_76815 | k141_76815_7 | 7539 | 8504 | - | Acyl_transf_3 |
| NULL(UNKNOWN) | k141_76815 | k141_76815_8 | 8660 | 9856 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_76815 | k141_76815_9 | 9872 | 11518 | - | GT4 |
| CAZyme | k141_76815 | k141_76815_10 | 11515 | 13266 | - | CE14 | GT2 |
Gene ID: k141_76815_5
Type: TC
Location: 5451 - 6761 (-)
Type: TC
Location: 5451 - 6761 (-)
Gene ID: k141_76815_6
Type: TC
Location: 6751 - 7524 (-)
Type: TC
Location: 6751 - 7524 (-)
Gene ID: k141_76815_7
Type: pfam
Location: 7539 - 8504 (-)
Type: pfam
Location: 7539 - 8504 (-)
Gene ID: k141_76815_8
Type:
Location: 8660 - 9856 (-)
Type:
Location: 8660 - 9856 (-)
Gene ID: k141_76815_9
Type: CAZyme
Location: 9872 - 11518 (-)
Type: CAZyme
Location: 9872 - 11518 (-)
Gene ID: k141_76815_10
Type: CAZyme
Location: 11515 - 13266 (-)
Type: CAZyme
Location: 11515 - 13266 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Comamonas
Species
Comamonas denitrificans_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.