Cluster: CGMR074231_CGC3
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR074231
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_77210 | k141_77210_25 | 29415 | 30638 | - | 8.A.59.4.2 |
| TC | k141_77210 | k141_77210_26 | 30913 | 31926 | - | 5.B.3.1.1 |
| TC | k141_77210 | k141_77210_27 | 32204 | 33850 | + | 4.C.1.1.7 |
| pfam | k141_77210 | k141_77210_28 | 34219 | 36099 | + | ThiC_Rad_SAM | ThiC-associated |
| TC | k141_77210 | k141_77210_29 | 36184 | 37791 | - | 1.B.52.2.1 |
| STP | k141_77210 | k141_77210_30 | 37984 | 39849 | - | PAS |
| TC | k141_77210 | k141_77210_31 | 39931 | 41067 | - | 8.A.59.4.2 |
| CAZyme | k141_77210 | k141_77210_32 | 41391 | 42479 | - | GH103 |
Gene ID: k141_77210_25
Type: TC
Location: 29415 - 30638 (-)
Type: TC
Location: 29415 - 30638 (-)
Gene ID: k141_77210_26
Type: TC
Location: 30913 - 31926 (-)
Type: TC
Location: 30913 - 31926 (-)
Gene ID: k141_77210_27
Type: TC
Location: 32204 - 33850 (+)
Type: TC
Location: 32204 - 33850 (+)
Gene ID: k141_77210_28
Type: pfam
Location: 34219 - 36099 (+)
Type: pfam
Location: 34219 - 36099 (+)
Gene ID: k141_77210_29
Type: TC
Location: 36184 - 37791 (-)
Type: TC
Location: 36184 - 37791 (-)
Gene ID: k141_77210_30
Type: STP
Location: 37984 - 39849 (-)
Type: STP
Location: 37984 - 39849 (-)
Gene ID: k141_77210_31
Type: TC
Location: 39931 - 41067 (-)
Type: TC
Location: 39931 - 41067 (-)
Gene ID: k141_77210_32
Type: CAZyme
Location: 41391 - 42479 (-)
Type: CAZyme
Location: 41391 - 42479 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Comamonas
Species
Comamonas denitrificans_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.