Cluster: CGMR074231_CGC15
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR074231
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_106662 | k141_106662_13 | 12187 | 13512 | - | 2.A.1.42.1 |
| pfam | k141_106662 | k141_106662_14 | 13622 | 14284 | + | Ala_racemase_N |
| CAZyme | k141_106662 | k141_106662_15 | 14397 | 15767 | + | AA7 |
| TC | k141_106662 | k141_106662_16 | 15858 | 17924 | - | 5.A.3.10.1 |
| pfam | k141_106662 | k141_106662_17 | 18089 | 19084 | + | DDE_Tnp_1 | DUF772 |
| TC | k141_106662 | k141_106662_18 | 20023 | 21321 | - | 3.A.9.1.1 |
| pfam | k141_106662 | k141_106662_19 | 21332 | 22009 | - | DUF2848 |
| TC | k141_106662 | k141_106662_20 | 22041 | 23324 | - | 2.A.56.1.10 |
Gene ID: k141_106662_13
Type: TC
Location: 12187 - 13512 (-)
Type: TC
Location: 12187 - 13512 (-)
Gene ID: k141_106662_14
Type: pfam
Location: 13622 - 14284 (+)
Type: pfam
Location: 13622 - 14284 (+)
Gene ID: k141_106662_15
Type: CAZyme
Location: 14397 - 15767 (+)
Type: CAZyme
Location: 14397 - 15767 (+)
Gene ID: k141_106662_16
Type: TC
Location: 15858 - 17924 (-)
Type: TC
Location: 15858 - 17924 (-)
Gene ID: k141_106662_17
Type: pfam
Location: 18089 - 19084 (+)
Type: pfam
Location: 18089 - 19084 (+)
Gene ID: k141_106662_18
Type: TC
Location: 20023 - 21321 (-)
Type: TC
Location: 20023 - 21321 (-)
Gene ID: k141_106662_19
Type: pfam
Location: 21332 - 22009 (-)
Type: pfam
Location: 21332 - 22009 (-)
Gene ID: k141_106662_20
Type: TC
Location: 22041 - 23324 (-)
Type: TC
Location: 22041 - 23324 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Comamonas
Species
Comamonas denitrificans_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.