Cluster: CGMR074231_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR074231
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_215410 | k141_215410_19 | 18150 | 19172 | + | 3.A.1.14.16 |
| TC | k141_215410 | k141_215410_20 | 19169 | 19936 | + | 3.A.1.14.6 |
| NULL(UNKNOWN) | k141_215410 | k141_215410_21 | 20037 | 20264 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_215410 | k141_215410_22 | 20261 | 20716 | - | Glycos_transf_2 |
| CAZyme | k141_215410 | k141_215410_23 | 20722 | 22305 | - | GT2 | GT2 |
Gene ID: k141_215410_19
Type: TC
Location: 18150 - 19172 (+)
Type: TC
Location: 18150 - 19172 (+)
Gene ID: k141_215410_20
Type: TC
Location: 19169 - 19936 (+)
Type: TC
Location: 19169 - 19936 (+)
Gene ID: k141_215410_21
Type:
Location: 20037 - 20264 (-)
Type:
Location: 20037 - 20264 (-)
Gene ID: k141_215410_22
Type: pfam
Location: 20261 - 20716 (-)
Type: pfam
Location: 20261 - 20716 (-)
Gene ID: k141_215410_23
Type: CAZyme
Location: 20722 - 22305 (-)
Type: CAZyme
Location: 20722 - 22305 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Comamonas
Species
Comamonas denitrificans_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.