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Cluster: CGMR074137_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_223646 k141_223646_9 7226 8905 - 4.C.1.1.4
pfam k141_223646 k141_223646_10 9054 11273 - DNA_topoisoIV | DNA_gyraseA_C | DNA_gyraseA_C
TC k141_223646 k141_223646_11 11437 12756 - 2.A.1.82.4
TC k141_223646 k141_223646_12 12904 13548 - 1.A.62.2.3
pfam k141_223646 k141_223646_13 13608 14075 - SEC-C | YchJ_M-like
TC k141_223646 k141_223646_14 14158 15729 - 2.A.109.2.3
pfam k141_223646 k141_223646_15 16068 16670 + Lysine_decarbox | LDcluster4
NULL(UNKNOWN) k141_223646 k141_223646_16 16747 17736 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_223646 k141_223646_17 18030 19421 + 2.A.1.3.26
CAZyme k141_223646 k141_223646_18 19512 20288 + GH25
Gene ID: k141_223646_9
Type: TC
Location: 7226 - 8905 (-)
Gene ID: k141_223646_10
Type: pfam
Location: 9054 - 11273 (-)
Gene ID: k141_223646_11
Type: TC
Location: 11437 - 12756 (-)
Gene ID: k141_223646_12
Type: TC
Location: 12904 - 13548 (-)
Gene ID: k141_223646_13
Type: pfam
Location: 13608 - 14075 (-)
Gene ID: k141_223646_14
Type: TC
Location: 14158 - 15729 (-)
Gene ID: k141_223646_15
Type: pfam
Location: 16068 - 16670 (+)
Gene ID: k141_223646_16
Type:
Location: 16747 - 17736 (-)
Gene ID: k141_223646_17
Type: TC
Location: 18030 - 19421 (+)
Gene ID: k141_223646_18
Type: CAZyme
Location: 19512 - 20288 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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