Cluster: CGMR073575_CGC5
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 10
- Substrate:
- Genome ID: CGMR073575
- CGC Family ID: CGCFAM_00065
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1513037 | k141_1513037_15 | 11181 | 13031 | + | 3.A.1.106.1 |
| NULL(UNKNOWN) | k141_1513037 | k141_1513037_16 | 13120 | 13710 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_1513037 | k141_1513037_17 | 13744 | 14691 | + | GT2 |
| NULL(UNKNOWN) | k141_1513037 | k141_1513037_18 | 14708 | 16864 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_1513037 | k141_1513037_19 | 16941 | 18344 | + | GT4 |
| NULL(UNKNOWN) | k141_1513037 | k141_1513037_20 | 18719 | 19558 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_1513037 | k141_1513037_21 | 19600 | 20724 | + | GT4 |
| CAZyme | k141_1513037 | k141_1513037_22 | 20825 | 21829 | + | GT2 |
| CAZyme | k141_1513037 | k141_1513037_23 | 21940 | 23082 | + | GT4 |
| CAZyme | k141_1513037 | k141_1513037_24 | 23378 | 24529 | + | GT4 |
| NULL(UNKNOWN) | k141_1513037 | k141_1513037_25 | 24526 | 24939 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_1513037 | k141_1513037_26 | 24936 | 25199 | + | Glyco_transf_4 |
| CAZyme | k141_1513037 | k141_1513037_27 | 25659 | 26045 | + | GT4 |
| CAZyme | k141_1513037 | k141_1513037_28 | 26064 | 27128 | + | GT2 |
| CAZyme | k141_1513037 | k141_1513037_29 | 27927 | 28250 | + | GT4 |
| CAZyme | k141_1513037 | k141_1513037_30 | 28244 | 29173 | + | GT2 |
Gene ID: k141_1513037_15
Type: TC
Location: 11181 - 13031 (+)
Type: TC
Location: 11181 - 13031 (+)
Gene ID: k141_1513037_16
Type:
Location: 13120 - 13710 (+)
Type:
Location: 13120 - 13710 (+)
Gene ID: k141_1513037_17
Type: CAZyme
Location: 13744 - 14691 (+)
Type: CAZyme
Location: 13744 - 14691 (+)
Gene ID: k141_1513037_18
Type:
Location: 14708 - 16864 (+)
Type:
Location: 14708 - 16864 (+)
Gene ID: k141_1513037_19
Type: CAZyme
Location: 16941 - 18344 (+)
Type: CAZyme
Location: 16941 - 18344 (+)
Gene ID: k141_1513037_20
Type:
Location: 18719 - 19558 (+)
Type:
Location: 18719 - 19558 (+)
Gene ID: k141_1513037_21
Type: CAZyme
Location: 19600 - 20724 (+)
Type: CAZyme
Location: 19600 - 20724 (+)
Gene ID: k141_1513037_22
Type: CAZyme
Location: 20825 - 21829 (+)
Type: CAZyme
Location: 20825 - 21829 (+)
Gene ID: k141_1513037_23
Type: CAZyme
Location: 21940 - 23082 (+)
Type: CAZyme
Location: 21940 - 23082 (+)
Gene ID: k141_1513037_24
Type: CAZyme
Location: 23378 - 24529 (+)
Type: CAZyme
Location: 23378 - 24529 (+)
Gene ID: k141_1513037_25
Type:
Location: 24526 - 24939 (+)
Type:
Location: 24526 - 24939 (+)
Gene ID: k141_1513037_26
Type: pfam
Location: 24936 - 25199 (+)
Type: pfam
Location: 24936 - 25199 (+)
Gene ID: k141_1513037_27
Type: CAZyme
Location: 25659 - 26045 (+)
Type: CAZyme
Location: 25659 - 26045 (+)
Gene ID: k141_1513037_28
Type: CAZyme
Location: 26064 - 27128 (+)
Type: CAZyme
Location: 26064 - 27128 (+)
Gene ID: k141_1513037_29
Type: CAZyme
Location: 27927 - 28250 (+)
Type: CAZyme
Location: 27927 - 28250 (+)
Gene ID: k141_1513037_30
Type: CAZyme
Location: 28244 - 29173 (+)
Type: CAZyme
Location: 28244 - 29173 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Cyanobacteriia
Order
Cyanobacteriales
Family
Microcoleaceae
Genus
Microcoleus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.