Cluster: CGMR073379_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR073379
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_850741 | k141_850741_18 | 19145 | 20593 | + | 3.A.24.1.1 |
| TC | k141_850741 | k141_850741_19 | 20860 | 22671 | - | 3.A.1.111.2 |
| TC | k141_850741 | k141_850741_20 | 22668 | 24500 | - | 3.A.1.111.2 |
| TC | k141_850741 | k141_850741_21 | 24592 | 25245 | - | 9.B.14.1.13 |
| TF | k141_850741 | k141_850741_22 | 25247 | 25948 | - | LytTR |
| CAZyme | k141_850741 | k141_850741_23 | 26389 | 28098 | - | GH20 |
| CAZyme | k141_850741 | k141_850741_24 | 28448 | 30583 | + | CBM67 | GH78 |
Gene ID: k141_850741_18
Type: TC
Location: 19145 - 20593 (+)
Type: TC
Location: 19145 - 20593 (+)
Gene ID: k141_850741_19
Type: TC
Location: 20860 - 22671 (-)
Type: TC
Location: 20860 - 22671 (-)
Gene ID: k141_850741_20
Type: TC
Location: 22668 - 24500 (-)
Type: TC
Location: 22668 - 24500 (-)
Gene ID: k141_850741_21
Type: TC
Location: 24592 - 25245 (-)
Type: TC
Location: 24592 - 25245 (-)
Gene ID: k141_850741_22
Type: TF
Location: 25247 - 25948 (-)
Type: TF
Location: 25247 - 25948 (-)
Gene ID: k141_850741_23
Type: CAZyme
Location: 26389 - 28098 (-)
Type: CAZyme
Location: 26389 - 28098 (-)
Gene ID: k141_850741_24
Type: CAZyme
Location: 28448 - 30583 (+)
Type: CAZyme
Location: 28448 - 30583 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
RGIG2000
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.