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Cluster: CGMR073379_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_654856 k141_654856_43 44049 45140 + GH179
pfam k141_654856 k141_654856_44 45164 46132 + AP_endonuc_2
STP k141_654856 k141_654856_45 46289 46933 - Peptidase_M23
TC k141_654856 k141_654856_46 47085 48272 + 2.A.4.7.6
pfam k141_654856 k141_654856_47 48283 50856 + CotH
TC k141_654856 k141_654856_48 51090 54152 - 3.A.1.134.6
NULL(UNKNOWN) k141_654856 k141_654856_49 54332 54817 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_654856 k141_654856_50 54840 56780 - 3.A.1.135.5
TC k141_654856 k141_654856_51 56777 56971 - 3.A.1.135.3
Gene ID: k141_654856_43
Type: CAZyme
Location: 44049 - 45140 (+)
Gene ID: k141_654856_44
Type: pfam
Location: 45164 - 46132 (+)
Gene ID: k141_654856_45
Type: STP
Location: 46289 - 46933 (-)
Gene ID: k141_654856_46
Type: TC
Location: 47085 - 48272 (+)
Gene ID: k141_654856_47
Type: pfam
Location: 48283 - 50856 (+)
Gene ID: k141_654856_48
Type: TC
Location: 51090 - 54152 (-)
Gene ID: k141_654856_49
Type:
Location: 54332 - 54817 (+)
Gene ID: k141_654856_50
Type: TC
Location: 54840 - 56780 (-)
Gene ID: k141_654856_51
Type: TC
Location: 56777 - 56971 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
RGIG2000
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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