Cluster: CGMR072969_CGC8
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR072969
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_24013 | k141_24013_12 | 13536 | 14357 | - | 4.A.6.1.19 |
| TC | k141_24013 | k141_24013_13 | 14341 | 15126 | - | 4.A.6.1.19 |
| TC | k141_24013 | k141_24013_14 | 15144 | 15614 | - | 4.A.6.1.19 |
| TC | k141_24013 | k141_24013_15 | 15625 | 16053 | - | 4.A.6.1.19 |
| STP | k141_24013 | k141_24013_16 | 16128 | 18902 | - | AAA |
| CAZyme | k141_24013 | k141_24013_17 | 19463 | 22138 | - | GH38 |
| TC | k141_24013 | k141_24013_18 | 22407 | 23507 | - | 4.A.2.1.6 |
| TC | k141_24013 | k141_24013_19 | 23526 | 23849 | - | 4.A.2.1.10 |
| TC | k141_24013 | k141_24013_20 | 23846 | 24307 | - | 4.A.2.1.8 |
| TF | k141_24013 | k141_24013_21 | 24555 | 26489 | + | HTH_11 | Mga |
| pfam | k141_24013 | k141_24013_22 | 26693 | 27010 | - | S6PP | Hydrolase_3 |
| TC | k141_24013 | k141_24013_23 | 27113 | 28843 | - | 3.A.1.12.5 |
| TC | k141_24013 | k141_24013_24 | 28836 | 30029 | - | 3.A.1.12.5 |
| TF | k141_24013 | k141_24013_25 | 30226 | 30861 | - | GntR |
| CAZyme | k141_24013 | k141_24013_26 | 31097 | 31906 | - | GH25 |
Gene ID: k141_24013_12
Type: TC
Location: 13536 - 14357 (-)
Type: TC
Location: 13536 - 14357 (-)
Gene ID: k141_24013_13
Type: TC
Location: 14341 - 15126 (-)
Type: TC
Location: 14341 - 15126 (-)
Gene ID: k141_24013_14
Type: TC
Location: 15144 - 15614 (-)
Type: TC
Location: 15144 - 15614 (-)
Gene ID: k141_24013_15
Type: TC
Location: 15625 - 16053 (-)
Type: TC
Location: 15625 - 16053 (-)
Gene ID: k141_24013_16
Type: STP
Location: 16128 - 18902 (-)
Type: STP
Location: 16128 - 18902 (-)
Gene ID: k141_24013_17
Type: CAZyme
Location: 19463 - 22138 (-)
Type: CAZyme
Location: 19463 - 22138 (-)
Gene ID: k141_24013_18
Type: TC
Location: 22407 - 23507 (-)
Type: TC
Location: 22407 - 23507 (-)
Gene ID: k141_24013_19
Type: TC
Location: 23526 - 23849 (-)
Type: TC
Location: 23526 - 23849 (-)
Gene ID: k141_24013_20
Type: TC
Location: 23846 - 24307 (-)
Type: TC
Location: 23846 - 24307 (-)
Gene ID: k141_24013_21
Type: TF
Location: 24555 - 26489 (+)
Type: TF
Location: 24555 - 26489 (+)
Gene ID: k141_24013_22
Type: pfam
Location: 26693 - 27010 (-)
Type: pfam
Location: 26693 - 27010 (-)
Gene ID: k141_24013_23
Type: TC
Location: 27113 - 28843 (-)
Type: TC
Location: 27113 - 28843 (-)
Gene ID: k141_24013_24
Type: TC
Location: 28836 - 30029 (-)
Type: TC
Location: 28836 - 30029 (-)
Gene ID: k141_24013_25
Type: TF
Location: 30226 - 30861 (-)
Type: TF
Location: 30226 - 30861 (-)
Gene ID: k141_24013_26
Type: CAZyme
Location: 31097 - 31906 (-)
Type: CAZyme
Location: 31097 - 31906 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_B
Species
Enterococcus_B pernyi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.