Cluster: CGMR072969_CGC40
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR072969
- CGC Family ID: CGCFAM_04514
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_33022 | k141_33022_42 | 41728 | 42534 | + | 3.A.1.104.1 |
| TC | k141_33022 | k141_33022_43 | 42546 | 43766 | + | 3.A.1.103.4 |
| pfam | k141_33022 | k141_33022_44 | 43756 | 45342 | + | MetW | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_31 |
| CAZyme | k141_33022 | k141_33022_45 | 45374 | 47512 | + | GT2 | GT2 |
| TC | k141_33022 | k141_33022_46 | 47727 | 49118 | + | 9.B.18.1.3 |
| CAZyme | k141_33022 | k141_33022_47 | 49136 | 50176 | + | GT2 |
| pfam | k141_33022 | k141_33022_48 | 50221 | 50937 | + | IspD | NTP_transf_3 |
| pfam | k141_33022 | k141_33022_49 | 50951 | 52012 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | k141_33022 | k141_33022_50 | 52105 | 53157 | + | GT4 |
| pfam | k141_33022 | k141_33022_51 | 53170 | 53985 | + | LicD |
| CAZyme | k141_33022 | k141_33022_52 | 53997 | 54980 | + | GT2 |
| NULL(UNKNOWN) | k141_33022 | k141_33022_53 | 54998 | 55948 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_33022 | k141_33022_54 | 55960 | 57021 | + | 9.B.183.1.7 |
Gene ID: k141_33022_42
Type: TC
Location: 41728 - 42534 (+)
Type: TC
Location: 41728 - 42534 (+)
Gene ID: k141_33022_43
Type: TC
Location: 42546 - 43766 (+)
Type: TC
Location: 42546 - 43766 (+)
Gene ID: k141_33022_44
Type: pfam
Location: 43756 - 45342 (+)
Type: pfam
Location: 43756 - 45342 (+)
Gene ID: k141_33022_45
Type: CAZyme
Location: 45374 - 47512 (+)
Type: CAZyme
Location: 45374 - 47512 (+)
Gene ID: k141_33022_46
Type: TC
Location: 47727 - 49118 (+)
Type: TC
Location: 47727 - 49118 (+)
Gene ID: k141_33022_47
Type: CAZyme
Location: 49136 - 50176 (+)
Type: CAZyme
Location: 49136 - 50176 (+)
Gene ID: k141_33022_48
Type: pfam
Location: 50221 - 50937 (+)
Type: pfam
Location: 50221 - 50937 (+)
Gene ID: k141_33022_49
Type: pfam
Location: 50951 - 52012 (+)
Type: pfam
Location: 50951 - 52012 (+)
Gene ID: k141_33022_50
Type: CAZyme
Location: 52105 - 53157 (+)
Type: CAZyme
Location: 52105 - 53157 (+)
Gene ID: k141_33022_51
Type: pfam
Location: 53170 - 53985 (+)
Type: pfam
Location: 53170 - 53985 (+)
Gene ID: k141_33022_52
Type: CAZyme
Location: 53997 - 54980 (+)
Type: CAZyme
Location: 53997 - 54980 (+)
Gene ID: k141_33022_53
Type:
Location: 54998 - 55948 (+)
Type:
Location: 54998 - 55948 (+)
Gene ID: k141_33022_54
Type: TC
Location: 55960 - 57021 (+)
Type: TC
Location: 55960 - 57021 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_B
Species
Enterococcus_B pernyi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.