Cluster: CGMR072969_CGC31
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR072969
- CGC Family ID: CGCFAM_08866
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_53149 | k141_53149_19 | 18715 | 20364 | + | 2.A.66.2.14 |
| pfam | k141_53149 | k141_53149_20 | 20396 | 21115 | + | PseudoU_synth_2 | S4 |
| TC | k141_53149 | k141_53149_21 | 21578 | 22270 | + | 3.A.1.140.1 |
| NULL(UNKNOWN) | k141_53149 | k141_53149_22 | 22239 | 22901 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_53149 | k141_53149_23 | 23372 | 24319 | + | 3.A.1.1.10 |
| TC | k141_53149 | k141_53149_24 | 24331 | 25251 | + | 3.A.1.1.29 |
| STP | k141_53149 | k141_53149_25 | 25277 | 26737 | + | SBP_bac_1 |
| TC | k141_53149 | k141_53149_26 | 26974 | 27588 | + | 9.B.28.1.11 |
| TC | k141_53149 | k141_53149_27 | 27581 | 29326 | + | 8.A.59.2.1 |
| TF | k141_53149 | k141_53149_28 | 29316 | 30770 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_53149 | k141_53149_29 | 31867 | 34020 | - | GH92 |
| TF | k141_53149 | k141_53149_30 | 34001 | 35068 | - | GntR |
| CAZyme | k141_53149 | k141_53149_31 | 35186 | 36508 | + | GH125 |
| CAZyme | k141_53149 | k141_53149_32 | 36523 | 39204 | + | GH38 |
Gene ID: k141_53149_19
Type: TC
Location: 18715 - 20364 (+)
Type: TC
Location: 18715 - 20364 (+)
Gene ID: k141_53149_20
Type: pfam
Location: 20396 - 21115 (+)
Type: pfam
Location: 20396 - 21115 (+)
Gene ID: k141_53149_21
Type: TC
Location: 21578 - 22270 (+)
Type: TC
Location: 21578 - 22270 (+)
Gene ID: k141_53149_22
Type:
Location: 22239 - 22901 (+)
Type:
Location: 22239 - 22901 (+)
Gene ID: k141_53149_23
Type: TC
Location: 23372 - 24319 (+)
Type: TC
Location: 23372 - 24319 (+)
Gene ID: k141_53149_24
Type: TC
Location: 24331 - 25251 (+)
Type: TC
Location: 24331 - 25251 (+)
Gene ID: k141_53149_25
Type: STP
Location: 25277 - 26737 (+)
Type: STP
Location: 25277 - 26737 (+)
Gene ID: k141_53149_26
Type: TC
Location: 26974 - 27588 (+)
Type: TC
Location: 26974 - 27588 (+)
Gene ID: k141_53149_27
Type: TC
Location: 27581 - 29326 (+)
Type: TC
Location: 27581 - 29326 (+)
Gene ID: k141_53149_28
Type: TF
Location: 29316 - 30770 (+)
Type: TF
Location: 29316 - 30770 (+)
Gene ID: k141_53149_29
Type: CAZyme
Location: 31867 - 34020 (-)
Type: CAZyme
Location: 31867 - 34020 (-)
Gene ID: k141_53149_30
Type: TF
Location: 34001 - 35068 (-)
Type: TF
Location: 34001 - 35068 (-)
Gene ID: k141_53149_31
Type: CAZyme
Location: 35186 - 36508 (+)
Type: CAZyme
Location: 35186 - 36508 (+)
Gene ID: k141_53149_32
Type: CAZyme
Location: 36523 - 39204 (+)
Type: CAZyme
Location: 36523 - 39204 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_B
Species
Enterococcus_B pernyi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.