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Cluster: CGMR072969_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_19828 k141_19828_33 16570 17343 - 3.A.1.5.37
TC k141_19828 k141_19828_34 17556 18404 - 3.A.1.24.2
TC k141_19828 k141_19828_35 18428 19114 - 3.A.1.24.2
TC k141_19828 k141_19828_36 19107 20141 - 3.A.1.24.2
pfam k141_19828 k141_19828_37 20526 20864 - Biotin_lipoyl | GCV_H
pfam k141_19828 k141_19828_38 20866 21222 - Glutaredoxin | ArsC
TC k141_19828 k141_19828_39 21229 22416 - 2.A.103.1.6
TF k141_19828 k141_19828_40 22604 23425 - HTH_1
pfam k141_19828 k141_19828_41 23715 24683 + SLAC1
TC k141_19828 k141_19828_42 24806 25849 + 2.A.98.1.3
pfam k141_19828 k141_19828_43 25936 26178 - DNA_binding_1
pfam k141_19828 k141_19828_44 26182 26400 - Methyltransf_1N
CAZyme k141_19828 k141_19828_45 26585 27559 + GT2
Gene ID: k141_19828_33
Type: TC
Location: 16570 - 17343 (-)
Gene ID: k141_19828_34
Type: TC
Location: 17556 - 18404 (-)
Gene ID: k141_19828_35
Type: TC
Location: 18428 - 19114 (-)
Gene ID: k141_19828_36
Type: TC
Location: 19107 - 20141 (-)
Gene ID: k141_19828_37
Type: pfam
Location: 20526 - 20864 (-)
Gene ID: k141_19828_38
Type: pfam
Location: 20866 - 21222 (-)
Gene ID: k141_19828_39
Type: TC
Location: 21229 - 22416 (-)
Gene ID: k141_19828_40
Type: TF
Location: 22604 - 23425 (-)
Gene ID: k141_19828_41
Type: pfam
Location: 23715 - 24683 (+)
Gene ID: k141_19828_42
Type: TC
Location: 24806 - 25849 (+)
Gene ID: k141_19828_43
Type: pfam
Location: 25936 - 26178 (-)
Gene ID: k141_19828_44
Type: pfam
Location: 26182 - 26400 (-)
Gene ID: k141_19828_45
Type: CAZyme
Location: 26585 - 27559 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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