dbCAN Logo

Cluster: CGMR072969_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_67766 k141_67766_21 16193 16969 + 8.A.3.2.4
TC k141_67766 k141_67766_22 16982 17659 + 8.A.3.2.1
pfam k141_67766 k141_67766_23 17677 18417 + CpsB_CapC
TC k141_67766 k141_67766_24 18439 20256 + 9.B.18.2.1
STP k141_67766 k141_67766_25 20273 21406 + Aminotran_1_2
TC k141_67766 k141_67766_26 21381 22004 + 9.B.18.1.3
pfam k141_67766 k141_67766_27 21973 22506 + Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4
pfam k141_67766 k141_67766_28 22518 23492 + ATP-grasp_3 | ATPgrasp_Ter | PylC-like_N
CAZyme k141_67766 k141_67766_29 23503 24714 + GT4
TC k141_67766 k141_67766_30 24717 25739 + 9.B.18.2.1
Gene ID: k141_67766_21
Type: TC
Location: 16193 - 16969 (+)
Gene ID: k141_67766_22
Type: TC
Location: 16982 - 17659 (+)
Gene ID: k141_67766_23
Type: pfam
Location: 17677 - 18417 (+)
Gene ID: k141_67766_24
Type: TC
Location: 18439 - 20256 (+)
Gene ID: k141_67766_25
Type: STP
Location: 20273 - 21406 (+)
Gene ID: k141_67766_26
Type: TC
Location: 21381 - 22004 (+)
Gene ID: k141_67766_27
Type: pfam
Location: 21973 - 22506 (+)
Gene ID: k141_67766_28
Type: pfam
Location: 22518 - 23492 (+)
Gene ID: k141_67766_29
Type: CAZyme
Location: 23503 - 24714 (+)
Gene ID: k141_67766_30
Type: TC
Location: 24717 - 25739 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List