dbCAN HGM

Cluster: CGMR072891_CGC1

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	k141_116626	k141_116626_2	1284	2399	-	GT104
TC	k141_116626	k141_116626_3	2495	3091	-	4.F.1.1.8
pfam	k141_116626	k141_116626_4	3112	5163	-	GIY-YIG \| UVR \| UvrC_RNaseH_dom \| HHH_5 \| UvrC_RNaseH
TC	k141_116626	k141_116626_5	5565	6551	+	2.A.7.17.1
NULL(UNKNOWN)	k141_116626	k141_116626_6	6751	7155	-	NULL(UNKNOWN) [View Structural Homologs]
TC	k141_116626	k141_116626_7	7477	8187	+	3.A.1.107.3
TC	k141_116626	k141_116626_8	8205	8873	+	3.A.1.107.4
TC	k141_116626	k141_116626_9	8906	9631	+	9.B.14.2.4
pfam	k141_116626	k141_116626_10	9628	9813	+	CcmD
pfam	k141_116626	k141_116626_11	9832	10314	+	CcmE
TC	k141_116626	k141_116626_12	10390	12351	+	9.B.14.1.7

Gene ID: k141_116626_2
Type: CAZyme
Location: 1284 - 2399 (-)

Gene ID: k141_116626_3
Type: TC
Location: 2495 - 3091 (-)

Gene ID: k141_116626_4
Type: pfam
Location: 3112 - 5163 (-)

Gene ID: k141_116626_5
Type: TC
Location: 5565 - 6551 (+)

Gene ID: k141_116626_6
Type:
Location: 6751 - 7155 (-)

Gene ID: k141_116626_7
Type: TC
Location: 7477 - 8187 (+)

Gene ID: k141_116626_8
Type: TC
Location: 8205 - 8873 (+)

Gene ID: k141_116626_9
Type: TC
Location: 8906 - 9631 (+)

Gene ID: k141_116626_10
Type: pfam
Location: 9628 - 9813 (+)

Gene ID: k141_116626_11
Type: pfam
Location: 9832 - 10314 (+)

Gene ID: k141_116626_12
Type: TC
Location: 10390 - 12351 (+)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Gene ID	Condition Pair	log2FC	FDR P-value
k141_116626_3	vegan > omnivore	2.52218	0.04105
k141_116626_3	vegetarian > omnivore	3.27611	0.02517
k141_116626_10	vegan > omnivore	3.73207	0.04105
k141_116626_10	vegetarian > omnivore	2.60697	0.02517