Cluster: CGMR072869_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR072869
- CGC Family ID: CGCFAM_00373
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_166058 | k141_166058_9 | 7062 | 7721 | - | 1.C.113.1.10 |
| pfam | k141_166058 | k141_166058_10 | 7885 | 8196 | - | ASCH |
| TF | k141_166058 | k141_166058_11 | 8242 | 8976 | + | HTH_6 |
| CAZyme | k141_166058 | k141_166058_12 | 9097 | 10530 | + | GH1 |
| TC | k141_166058 | k141_166058_13 | 10590 | 11492 | - | 9.B.153.2.1 |
Gene ID: k141_166058_9
Type: TC
Location: 7062 - 7721 (-)
Type: TC
Location: 7062 - 7721 (-)
Gene ID: k141_166058_10
Type: pfam
Location: 7885 - 8196 (-)
Type: pfam
Location: 7885 - 8196 (-)
Gene ID: k141_166058_11
Type: TF
Location: 8242 - 8976 (+)
Type: TF
Location: 8242 - 8976 (+)
Gene ID: k141_166058_12
Type: CAZyme
Location: 9097 - 10530 (+)
Type: CAZyme
Location: 9097 - 10530 (+)
Gene ID: k141_166058_13
Type: TC
Location: 10590 - 11492 (-)
Type: TC
Location: 10590 - 11492 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Species
Citrobacter sp001037495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_166058_11 | vegetarian > vegan | 1.88564 | 0.02588 |