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Cluster: CGMR072869_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_280895 k141_280895_25 22477 23562 + GH23
TC k141_280895 k141_280895_26 23775 25031 + 2.A.1.10.1
pfam k141_280895 k141_280895_27 25088 27274 - OKR_DC_1 | OKR_DC_1_N | OKR_DC_1_C
TC k141_280895 k141_280895_28 27693 28400 + 9.B.120.1.1
pfam k141_280895 k141_280895_29 29036 29314 - Nitrate_red_del
NULL(UNKNOWN) k141_280895 k141_280895_30 29434 29571 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_280895 k141_280895_31 29614 30471 - 5.A.3.3.1
TC k141_280895 k141_280895_32 30473 31090 - 5.A.3.3.2
TC k141_280895 k141_280895_33 31101 33536 - 5.A.3.3.1
STP k141_280895 k141_280895_34 34410 35402 - PALP
pfam k141_280895 k141_280895_35 35466 35852 - Ribonuc_L-PSP
TC k141_280895 k141_280895_36 35878 37296 - 2.A.35.2.1
Gene ID: k141_280895_25
Type: CAZyme
Location: 22477 - 23562 (+)
Gene ID: k141_280895_26
Type: TC
Location: 23775 - 25031 (+)
Gene ID: k141_280895_27
Type: pfam
Location: 25088 - 27274 (-)
Gene ID: k141_280895_28
Type: TC
Location: 27693 - 28400 (+)
Gene ID: k141_280895_29
Type: pfam
Location: 29036 - 29314 (-)
Gene ID: k141_280895_30
Type:
Location: 29434 - 29571 (-)
Gene ID: k141_280895_31
Type: TC
Location: 29614 - 30471 (-)
Gene ID: k141_280895_32
Type: TC
Location: 30473 - 31090 (-)
Gene ID: k141_280895_33
Type: TC
Location: 31101 - 33536 (-)
Gene ID: k141_280895_34
Type: STP
Location: 34410 - 35402 (-)
Gene ID: k141_280895_35
Type: pfam
Location: 35466 - 35852 (-)
Gene ID: k141_280895_36
Type: TC
Location: 35878 - 37296 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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