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Cluster: CGMR072869_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_45196 k141_45196_3 614 1000 - 2.A.7.22.1
TC k141_45196 k141_45196_4 1000 1335 - 2.A.7.22.2
CAZyme k141_45196 k141_45196_5 1332 2990 - GT83
pfam k141_45196 k141_45196_6 2987 3886 - Polysacc_deac_1
pfam k141_45196 k141_45196_7 3883 5865 - Formyl_trans_N | 3Beta_HSD | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
CAZyme k141_45196 k141_45196_8 5862 6845 - GT2
STP k141_45196 k141_45196_9 6848 7987 - Aminotran_1_2
STP k141_45196 k141_45196_10 8249 8674 - NUDIX
TC k141_45196 k141_45196_11 8903 9445 + 1.B.68.1.1
Gene ID: k141_45196_3
Type: TC
Location: 614 - 1000 (-)
Gene ID: k141_45196_4
Type: TC
Location: 1000 - 1335 (-)
Gene ID: k141_45196_5
Type: CAZyme
Location: 1332 - 2990 (-)
Gene ID: k141_45196_6
Type: pfam
Location: 2987 - 3886 (-)
Gene ID: k141_45196_7
Type: pfam
Location: 3883 - 5865 (-)
Gene ID: k141_45196_8
Type: CAZyme
Location: 5862 - 6845 (-)
Gene ID: k141_45196_9
Type: STP
Location: 6848 - 7987 (-)
Gene ID: k141_45196_10
Type: STP
Location: 8249 - 8674 (-)
Gene ID: k141_45196_11
Type: TC
Location: 8903 - 9445 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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