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Cluster: CGMR072869_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_8828 k141_8828_27 26329 27336 + GT9
CAZyme k141_8828 k141_8828_28 27340 28308 + GT9
TC k141_8828 k141_8828_29 28325 29608 + 9.B.67.5.1
CAZyme k141_8828 k141_8828_30 29601 30623 + GT2
CAZyme k141_8828 k141_8828_31 30616 31671 + GT9
CAZyme k141_8828 k141_8828_32 31672 32616 + GT8
CAZyme k141_8828 k141_8828_33 32641 33633 - GT8
CAZyme k141_8828 k141_8828_34 33682 34701 - GT8
pfam k141_8828 k141_8828_35 34732 35529 - Kdo
CAZyme k141_8828 k141_8828_36 35532 36647 - GT4
CAZyme k141_8828 k141_8828_37 37071 38348 + GT30
Gene ID: k141_8828_27
Type: CAZyme
Location: 26329 - 27336 (+)
Gene ID: k141_8828_28
Type: CAZyme
Location: 27340 - 28308 (+)
Gene ID: k141_8828_29
Type: TC
Location: 28325 - 29608 (+)
Gene ID: k141_8828_30
Type: CAZyme
Location: 29601 - 30623 (+)
Gene ID: k141_8828_31
Type: CAZyme
Location: 30616 - 31671 (+)
Gene ID: k141_8828_32
Type: CAZyme
Location: 31672 - 32616 (+)
Gene ID: k141_8828_33
Type: CAZyme
Location: 32641 - 33633 (-)
Gene ID: k141_8828_34
Type: CAZyme
Location: 33682 - 34701 (-)
Gene ID: k141_8828_35
Type: pfam
Location: 34732 - 35529 (-)
Gene ID: k141_8828_36
Type: CAZyme
Location: 35532 - 36647 (-)
Gene ID: k141_8828_37
Type: CAZyme
Location: 37071 - 38348 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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