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Cluster: CGMR072869_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_259473 k141_259473_8 7188 7907 - 9.B.114.1.1
pfam k141_259473 k141_259473_9 8038 8922 - dCMP_cyt_deam_1 | dCMP_cyt_deam_2
TC k141_259473 k141_259473_10 9071 9766 - 2.A.122.1.1
TC k141_259473 k141_259473_11 9763 10161 - 1.E.14.1.4
pfam k141_259473 k141_259473_12 10379 11317 + Dus
pfam k141_259473 k141_259473_13 11595 12329 - Ubie_methyltran | FtsJ | CMAS | Methyltransf_9 | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC k141_259473 k141_259473_14 12499 13938 + 1.B.17.3.10
TC k141_259473 k141_259473_15 13976 14545 - 9.B.27.2.7
TC k141_259473 k141_259473_16 14709 15296 + 9.B.29.3.1
peptidase k141_259473 k141_259473_17 15476 16423 + S11.002
pfam k141_259473 k141_259473_18 16490 18229 - FAD_binding_4 | Lact-deh-memb
CAZyme k141_259473 k141_259473_19 18461 20758 + GH3
TC k141_259473 k141_259473_20 20955 21872 + 3.A.1.12.15
TC k141_259473 k141_259473_21 21894 23054 + 3.A.1.12.15
TC k141_259473 k141_259473_22 23047 23994 + 3.A.1.12.15
TC k141_259473 k141_259473_23 23978 24709 + 3.A.1.12.15
NULL(UNKNOWN) k141_259473 k141_259473_24 24690 24797 - NULL(UNKNOWN)
[View Structural Homologs]
TF k141_259473 k141_259473_25 24849 25595 - MerR
TC k141_259473 k141_259473_26 25806 27491 + 9.B.33.1.1
Gene ID: k141_259473_8
Type: TC
Location: 7188 - 7907 (-)
Gene ID: k141_259473_9
Type: pfam
Location: 8038 - 8922 (-)
Gene ID: k141_259473_10
Type: TC
Location: 9071 - 9766 (-)
Gene ID: k141_259473_11
Type: TC
Location: 9763 - 10161 (-)
Gene ID: k141_259473_12
Type: pfam
Location: 10379 - 11317 (+)
Gene ID: k141_259473_13
Type: pfam
Location: 11595 - 12329 (-)
Gene ID: k141_259473_14
Type: TC
Location: 12499 - 13938 (+)
Gene ID: k141_259473_15
Type: TC
Location: 13976 - 14545 (-)
Gene ID: k141_259473_16
Type: TC
Location: 14709 - 15296 (+)
Gene ID: k141_259473_17
Type: peptidase
Location: 15476 - 16423 (+)
Gene ID: k141_259473_18
Type: pfam
Location: 16490 - 18229 (-)
Gene ID: k141_259473_19
Type: CAZyme
Location: 18461 - 20758 (+)
Gene ID: k141_259473_20
Type: TC
Location: 20955 - 21872 (+)
Gene ID: k141_259473_21
Type: TC
Location: 21894 - 23054 (+)
Gene ID: k141_259473_22
Type: TC
Location: 23047 - 23994 (+)
Gene ID: k141_259473_23
Type: TC
Location: 23978 - 24709 (+)
Gene ID: k141_259473_24
Type:
Location: 24690 - 24797 (-)
Gene ID: k141_259473_25
Type: TF
Location: 24849 - 25595 (-)
Gene ID: k141_259473_26
Type: TC
Location: 25806 - 27491 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_259473_18 vegetarian > vegan 1.08731 0.02538
k141_259473_19 vegetarian > vegan 1.00816 0.02588

🧭 Explore Read Mapping of CGC

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