Cluster: CGMR072780_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: CGMR072780
- CGC Family ID: CGCFAM_00725
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_304179 | k141_304179_7 | 5667 | 7493 | - | CBM34 | GH13_20 |
| TC | k141_304179 | k141_304179_8 | 7515 | 8840 | - | 3.A.1.1.26 |
| TC | k141_304179 | k141_304179_9 | 8910 | 9734 | - | 3.A.1.1.6 |
| TC | k141_304179 | k141_304179_10 | 9747 | 11078 | - | 3.A.1.1.6 |
| TF | k141_304179 | k141_304179_11 | 11211 | 12131 | + | LacI |
| pfam | k141_304179 | k141_304179_12 | 12503 | 13078 | + | DUF218 |
| CAZyme | k141_304179 | k141_304179_13 | 13203 | 15479 | - | GT2 |
Gene ID: k141_304179_7
Type: CAZyme
Location: 5667 - 7493 (-)
Type: CAZyme
Location: 5667 - 7493 (-)
Gene ID: k141_304179_8
Type: TC
Location: 7515 - 8840 (-)
Type: TC
Location: 7515 - 8840 (-)
Gene ID: k141_304179_9
Type: TC
Location: 8910 - 9734 (-)
Type: TC
Location: 8910 - 9734 (-)
Gene ID: k141_304179_10
Type: TC
Location: 9747 - 11078 (-)
Type: TC
Location: 9747 - 11078 (-)
Gene ID: k141_304179_11
Type: TF
Location: 11211 - 12131 (+)
Type: TF
Location: 11211 - 12131 (+)
Gene ID: k141_304179_12
Type: pfam
Location: 12503 - 13078 (+)
Type: pfam
Location: 12503 - 13078 (+)
Gene ID: k141_304179_13
Type: CAZyme
Location: 13203 - 15479 (-)
Type: CAZyme
Location: 13203 - 15479 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
JAAYRG01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.