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Cluster: CGMR072590_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_189032 k141_189032_27 27401 28507 + GT4
CAZyme k141_189032 k141_189032_28 28504 29781 + GT4
STP k141_189032 k141_189032_29 29794 30951 + Aminotran_1_2
TC k141_189032 k141_189032_30 30951 31559 + 9.B.18.1.1
TC k141_189032 k141_189032_31 31581 33578 + 9.B.18.2.1
TC k141_189032 k141_189032_32 33768 34646 + 9.B.1.1.6
pfam k141_189032 k141_189032_33 34739 35335 - ABC_trans_aux
pfam k141_189032 k141_189032_34 35386 36327 - MlaD
TC k141_189032 k141_189032_35 36327 37127 - 3.A.1.27.1
TC k141_189032 k141_189032_36 37140 38276 - 3.A.1.27.1
Gene ID: k141_189032_27
Type: CAZyme
Location: 27401 - 28507 (+)
Gene ID: k141_189032_28
Type: CAZyme
Location: 28504 - 29781 (+)
Gene ID: k141_189032_29
Type: STP
Location: 29794 - 30951 (+)
Gene ID: k141_189032_30
Type: TC
Location: 30951 - 31559 (+)
Gene ID: k141_189032_31
Type: TC
Location: 31581 - 33578 (+)
Gene ID: k141_189032_32
Type: TC
Location: 33768 - 34646 (+)
Gene ID: k141_189032_33
Type: pfam
Location: 34739 - 35335 (-)
Gene ID: k141_189032_34
Type: pfam
Location: 35386 - 36327 (-)
Gene ID: k141_189032_35
Type: TC
Location: 36327 - 37127 (-)
Gene ID: k141_189032_36
Type: TC
Location: 37140 - 38276 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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