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Cluster: CGMR072590_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_158043 k141_158043_3 1591 3927 + 8.A.59.2.2
pfam k141_158043 k141_158043_4 3930 4568 + Lactamase_B
TC k141_158043 k141_158043_5 4641 6242 + 2.A.1.25.5
NULL(UNKNOWN) k141_158043 k141_158043_6 6283 7026 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_158043 k141_158043_7 7045 7893 + GT25
pfam k141_158043 k141_158043_8 7906 9144 + Wzy_C
CAZyme k141_158043 k141_158043_9 9249 10361 - GT4
CAZyme k141_158043 k141_158043_10 10384 11409 - GT2
CAZyme k141_158043 k141_158043_11 11525 12406 - GT2
Gene ID: k141_158043_3
Type: TC
Location: 1591 - 3927 (+)
Gene ID: k141_158043_4
Type: pfam
Location: 3930 - 4568 (+)
Gene ID: k141_158043_5
Type: TC
Location: 4641 - 6242 (+)
Gene ID: k141_158043_6
Type:
Location: 6283 - 7026 (+)
Gene ID: k141_158043_7
Type: CAZyme
Location: 7045 - 7893 (+)
Gene ID: k141_158043_8
Type: pfam
Location: 7906 - 9144 (+)
Gene ID: k141_158043_9
Type: CAZyme
Location: 9249 - 10361 (-)
Gene ID: k141_158043_10
Type: CAZyme
Location: 10384 - 11409 (-)
Gene ID: k141_158043_11
Type: CAZyme
Location: 11525 - 12406 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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