Cluster: CGMR072121_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR072121
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_453451 | k141_453451_12 | 9963 | 11063 | - | 3.D.2.1.1 |
| TF | k141_453451 | k141_453451_13 | 11164 | 11910 | - | GntR |
| TC | k141_453451 | k141_453451_14 | 12105 | 13616 | + | 3.A.1.2.19 |
| TC | k141_453451 | k141_453451_15 | 13624 | 14679 | + | 3.A.1.2.18 |
| STP | k141_453451 | k141_453451_16 | 14676 | 15638 | + | Peripla_BP_1 |
| STP | k141_453451 | k141_453451_17 | 15629 | 16624 | - | PfkB |
| CAZyme | k141_453451 | k141_453451_18 | 16722 | 18083 | + | GH4 |
Gene ID: k141_453451_12
Type: TC
Location: 9963 - 11063 (-)
Type: TC
Location: 9963 - 11063 (-)
Gene ID: k141_453451_13
Type: TF
Location: 11164 - 11910 (-)
Type: TF
Location: 11164 - 11910 (-)
Gene ID: k141_453451_14
Type: TC
Location: 12105 - 13616 (+)
Type: TC
Location: 12105 - 13616 (+)
Gene ID: k141_453451_15
Type: TC
Location: 13624 - 14679 (+)
Type: TC
Location: 13624 - 14679 (+)
Gene ID: k141_453451_16
Type: STP
Location: 14676 - 15638 (+)
Type: STP
Location: 14676 - 15638 (+)
Gene ID: k141_453451_17
Type: STP
Location: 15629 - 16624 (-)
Type: STP
Location: 15629 - 16624 (-)
Gene ID: k141_453451_18
Type: CAZyme
Location: 16722 - 18083 (+)
Type: CAZyme
Location: 16722 - 18083 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Trueperella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.