Cluster: CGMR072121_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR072121
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_111697 | k141_111697_1 | 90 | 2189 | + | GH3 |
| NULL(UNKNOWN) | k141_111697 | k141_111697_2 | 2332 | 2658 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_111697 | k141_111697_3 | 2627 | 3724 | + | 2.A.27.2.1 |
| NULL(UNKNOWN) | k141_111697 | k141_111697_4 | 3787 | 4710 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_111697 | k141_111697_5 | 4707 | 5078 | + | GntR |
| TC | k141_111697 | k141_111697_6 | 5138 | 5884 | + | 2.A.78.1.2 |
Gene ID: k141_111697_1
Type: CAZyme
Location: 90 - 2189 (+)
Type: CAZyme
Location: 90 - 2189 (+)
Gene ID: k141_111697_2
Type:
Location: 2332 - 2658 (+)
Type:
Location: 2332 - 2658 (+)
Gene ID: k141_111697_3
Type: TC
Location: 2627 - 3724 (+)
Type: TC
Location: 2627 - 3724 (+)
Gene ID: k141_111697_4
Type:
Location: 3787 - 4710 (+)
Type:
Location: 3787 - 4710 (+)
Gene ID: k141_111697_5
Type: TF
Location: 4707 - 5078 (+)
Type: TF
Location: 4707 - 5078 (+)
Gene ID: k141_111697_6
Type: TC
Location: 5138 - 5884 (+)
Type: TC
Location: 5138 - 5884 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Trueperella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.