Cluster: CGMR072121_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR072121
- CGC Family ID: CGCFAM_07803
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_402796 | k141_402796_58 | 65231 | 66082 | - | 3.A.1.5.38 |
| TC | k141_402796 | k141_402796_59 | 66079 | 68205 | - | 3.A.1.5.35 |
| TC | k141_402796 | k141_402796_60 | 68207 | 69160 | - | 3.A.1.5.38 |
| TC | k141_402796 | k141_402796_61 | 69303 | 70898 | - | 3.A.1.5.38 |
| TF | k141_402796 | k141_402796_62 | 71070 | 71732 | + | GntR |
| peptidase | k141_402796 | k141_402796_63 | 71732 | 73489 | + | S09.UPC |
| CAZyme | k141_402796 | k141_402796_64 | 73498 | 75579 | + | GH33 |
Gene ID: k141_402796_58
Type: TC
Location: 65231 - 66082 (-)
Type: TC
Location: 65231 - 66082 (-)
Gene ID: k141_402796_59
Type: TC
Location: 66079 - 68205 (-)
Type: TC
Location: 66079 - 68205 (-)
Gene ID: k141_402796_60
Type: TC
Location: 68207 - 69160 (-)
Type: TC
Location: 68207 - 69160 (-)
Gene ID: k141_402796_61
Type: TC
Location: 69303 - 70898 (-)
Type: TC
Location: 69303 - 70898 (-)
Gene ID: k141_402796_62
Type: TF
Location: 71070 - 71732 (+)
Type: TF
Location: 71070 - 71732 (+)
Gene ID: k141_402796_63
Type: peptidase
Location: 71732 - 73489 (+)
Type: peptidase
Location: 71732 - 73489 (+)
Gene ID: k141_402796_64
Type: CAZyme
Location: 73498 - 75579 (+)
Type: CAZyme
Location: 73498 - 75579 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Trueperella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.