Cluster: CGMR072121_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR072121
- CGC Family ID: CGCFAM_02693
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_402796 | k141_402796_8 | 12325 | 13278 | - | 3.A.1.1.6 |
| TC | k141_402796 | k141_402796_9 | 13275 | 14891 | - | 3.A.1.1.1 |
| TC | k141_402796 | k141_402796_10 | 14979 | 16247 | - | 3.A.1.1.22 |
| TF | k141_402796 | k141_402796_11 | 16540 | 17550 | + | LacI |
| CAZyme | k141_402796 | k141_402796_12 | 17619 | 19316 | + | GH13_30 |
Gene ID: k141_402796_8
Type: TC
Location: 12325 - 13278 (-)
Type: TC
Location: 12325 - 13278 (-)
Gene ID: k141_402796_9
Type: TC
Location: 13275 - 14891 (-)
Type: TC
Location: 13275 - 14891 (-)
Gene ID: k141_402796_10
Type: TC
Location: 14979 - 16247 (-)
Type: TC
Location: 14979 - 16247 (-)
Gene ID: k141_402796_11
Type: TF
Location: 16540 - 17550 (+)
Type: TF
Location: 16540 - 17550 (+)
Gene ID: k141_402796_12
Type: CAZyme
Location: 17619 - 19316 (+)
Type: CAZyme
Location: 17619 - 19316 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Trueperella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.