Cluster: CGMR072026_CGC14
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR072026
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1624889 | k141_1624889_8 | 6292 | 6765 | + | 1.A.22.1.1 |
| pfam | k141_1624889 | k141_1624889_9 | 6864 | 7382 | - | YkuD_2 |
| pfam | k141_1624889 | k141_1624889_10 | 7366 | 8073 | - | SIR2 |
| CAZyme | k141_1624889 | k141_1624889_11 | 8088 | 9572 | - | GH29 |
| TC | k141_1624889 | k141_1624889_12 | 9697 | 10947 | + | 2.A.23.1.2 |
| pfam | k141_1624889 | k141_1624889_13 | 11060 | 11620 | + | DUF4251 |
| NULL(UNKNOWN) | k141_1624889 | k141_1624889_14 | 11621 | 11770 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_1624889 | k141_1624889_15 | 11774 | 14140 | - | 9.A.8.1.6 |
Gene ID: k141_1624889_8
Type: TC
Location: 6292 - 6765 (+)
Type: TC
Location: 6292 - 6765 (+)
Gene ID: k141_1624889_9
Type: pfam
Location: 6864 - 7382 (-)
Type: pfam
Location: 6864 - 7382 (-)
Gene ID: k141_1624889_10
Type: pfam
Location: 7366 - 8073 (-)
Type: pfam
Location: 7366 - 8073 (-)
Gene ID: k141_1624889_11
Type: CAZyme
Location: 8088 - 9572 (-)
Type: CAZyme
Location: 8088 - 9572 (-)
Gene ID: k141_1624889_12
Type: TC
Location: 9697 - 10947 (+)
Type: TC
Location: 9697 - 10947 (+)
Gene ID: k141_1624889_13
Type: pfam
Location: 11060 - 11620 (+)
Type: pfam
Location: 11060 - 11620 (+)
Gene ID: k141_1624889_14
Type:
Location: 11621 - 11770 (-)
Type:
Location: 11621 - 11770 (-)
Gene ID: k141_1624889_15
Type: TC
Location: 11774 - 14140 (-)
Type: TC
Location: 11774 - 14140 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp017629985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.