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Cluster: CGMR072026_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1270344 k141_1270344_23 23193 24521 + 2.A.2.6.2
TC k141_1270344 k141_1270344_24 24582 27635 + 1.B.14.6.1
pfam k141_1270344 k141_1270344_25 27658 29412 + SusD_RagB | SusD-like_2 | SusD-like_3
NULL(UNKNOWN) k141_1270344 k141_1270344_26 29471 30289 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_1270344 k141_1270344_27 30403 32523 + GH13_45
CAZyme k141_1270344 k141_1270344_28 32582 33979 + GH13
CAZyme k141_1270344 k141_1270344_29 34042 35328 + GH13
CAZyme k141_1270344 k141_1270344_30 35348 37213 + GH13_46
Gene ID: k141_1270344_23
Type: TC
Location: 23193 - 24521 (+)
Gene ID: k141_1270344_24
Type: TC
Location: 24582 - 27635 (+)
Gene ID: k141_1270344_25
Type: pfam
Location: 27658 - 29412 (+)
Gene ID: k141_1270344_26
Type:
Location: 29471 - 30289 (+)
Gene ID: k141_1270344_27
Type: CAZyme
Location: 30403 - 32523 (+)
Gene ID: k141_1270344_28
Type: CAZyme
Location: 32582 - 33979 (+)
Gene ID: k141_1270344_29
Type: CAZyme
Location: 34042 - 35328 (+)
Gene ID: k141_1270344_30
Type: CAZyme
Location: 35348 - 37213 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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