dbCAN Logo

Cluster: CGMR072025_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_241630 k141_241630_1 3 503 - GH109
TC k141_241630 k141_241630_2 553 3075 - 3.A.9.1.2
NULL(UNKNOWN) k141_241630 k141_241630_3 3234 3452 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_241630 k141_241630_4 3482 4582 + GT4
pfam k141_241630 k141_241630_5 4592 5011 + SufE
CAZyme k141_241630 k141_241630_6 5056 6003 + GT9
pfam k141_241630 k141_241630_7 6308 8434 + GTP_EFTU | EFG_C | MMR_HSR1 | GTP_EFTU_D2 | EFG_IV | EFG_IV | EFG_III | EF-G_D2
TC k141_241630 k141_241630_8 8781 10892 + 1.B.14.14.1
NULL(UNKNOWN) k141_241630 k141_241630_9 10969 11670 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_241630 k141_241630_10 11658 12173 + 4.C.3.1.2
Gene ID: k141_241630_1
Type: CAZyme
Location: 3 - 503 (-)
Gene ID: k141_241630_2
Type: TC
Location: 553 - 3075 (-)
Gene ID: k141_241630_3
Type:
Location: 3234 - 3452 (+)
Gene ID: k141_241630_4
Type: CAZyme
Location: 3482 - 4582 (+)
Gene ID: k141_241630_5
Type: pfam
Location: 4592 - 5011 (+)
Gene ID: k141_241630_6
Type: CAZyme
Location: 5056 - 6003 (+)
Gene ID: k141_241630_7
Type: pfam
Location: 6308 - 8434 (+)
Gene ID: k141_241630_8
Type: TC
Location: 8781 - 10892 (+)
Gene ID: k141_241630_9
Type:
Location: 10969 - 11670 (+)
Gene ID: k141_241630_10
Type: TC
Location: 11658 - 12173 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List