Cluster: CGMR071978_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR071978
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_91887 | k141_91887_70 | 77050 | 78384 | + | 1.C.105.2.8 |
| TF | k141_91887 | k141_91887_71 | 78439 | 79419 | + | LacI |
| TC | k141_91887 | k141_91887_72 | 79642 | 81570 | + | 4.A.1.2.12 |
| CAZyme | k141_91887 | k141_91887_73 | 81605 | 83071 | + | GH32 |
Gene ID: k141_91887_70
Type: TC
Location: 77050 - 78384 (+)
Type: TC
Location: 77050 - 78384 (+)
Gene ID: k141_91887_71
Type: TF
Location: 78439 - 79419 (+)
Type: TF
Location: 78439 - 79419 (+)
Gene ID: k141_91887_72
Type: TC
Location: 79642 - 81570 (+)
Type: TC
Location: 79642 - 81570 (+)
Gene ID: k141_91887_73
Type: CAZyme
Location: 81605 - 83071 (+)
Type: CAZyme
Location: 81605 - 83071 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes amylophilus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_91887_71 | vegan > omnivore | 1.54496 | 0.00241 |
| k141_91887_73 | vegan > omnivore | 1.09805 | 0.00241 |