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Cluster: CGMR071978_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_91887 k141_91887_28 29194 30129 + 3.A.5.1.1
STP k141_91887 k141_91887_29 30131 31348 + ACT | PALP
CAZyme k141_91887 k141_91887_30 31691 33871 + CBM48 | GH13_9
pfam k141_91887 k141_91887_31 33888 35072 + NTP_transferase | Hexapep_GlmU
pfam k141_91887 k141_91887_32 35086 36219 + NTP_transferase | Hexapep_GlmU
CAZyme k141_91887 k141_91887_33 36212 37657 + GT5
CAZyme k141_91887 k141_91887_34 37720 40158 + GT35
CAZyme k141_91887 k141_91887_35 40186 42108 + GH13_39
TF k141_91887 k141_91887_36 42303 42674 + Pencillinase_R
peptidase k141_91887 k141_91887_37 42661 44091 + M56.UPW
TC k141_91887 k141_91887_38 44445 46127 - 2.A.58.2.2
Gene ID: k141_91887_28
Type: TC
Location: 29194 - 30129 (+)
Gene ID: k141_91887_29
Type: STP
Location: 30131 - 31348 (+)
Gene ID: k141_91887_30
Type: CAZyme
Location: 31691 - 33871 (+)
Gene ID: k141_91887_31
Type: pfam
Location: 33888 - 35072 (+)
Gene ID: k141_91887_32
Type: pfam
Location: 35086 - 36219 (+)
Gene ID: k141_91887_33
Type: CAZyme
Location: 36212 - 37657 (+)
Gene ID: k141_91887_34
Type: CAZyme
Location: 37720 - 40158 (+)
Gene ID: k141_91887_35
Type: CAZyme
Location: 40186 - 42108 (+)
Gene ID: k141_91887_36
Type: TF
Location: 42303 - 42674 (+)
Gene ID: k141_91887_37
Type: peptidase
Location: 42661 - 44091 (+)
Gene ID: k141_91887_38
Type: TC
Location: 44445 - 46127 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_91887_34 vegan > omnivore 1.14206 0.00241

🧭 Explore Read Mapping of CGC

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