Cluster: CGMR071978_CGC14
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR071978
- CGC Family ID: CGCFAM_05618
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_43955 | k141_43955_3 | 1306 | 3843 | + | GT51 |
| pfam | k141_43955 | k141_43955_4 | 3892 | 4248 | - | SpoVAC_SpoVAEB |
| TC | k141_43955 | k141_43955_5 | 4248 | 5264 | - | 9.A.11.1.1 |
| TC | k141_43955 | k141_43955_6 | 5261 | 5725 | - | 9.A.11.1.1 |
| TC | k141_43955 | k141_43955_7 | 5751 | 6167 | - | 9.A.11.1.1 |
| TC | k141_43955 | k141_43955_8 | 6154 | 6777 | - | 9.A.11.1.1 |
| TF | k141_43955 | k141_43955_9 | 6900 | 7433 | + | 0041905 |
| pfam | k141_43955 | k141_43955_10 | 7434 | 8036 | - | MMR_HSR1 | FeoB_N |
| CAZyme | k141_43955 | k141_43955_11 | 8094 | 8864 | - | CE4 |
| pfam | k141_43955 | k141_43955_12 | 9031 | 11148 | - | Gln-synt_C | GSIII_N | Gln-synt_C-ter |
| TC | k141_43955 | k141_43955_13 | 11486 | 11845 | - | 3.A.1.32.2 |
| TC | k141_43955 | k141_43955_14 | 11916 | 12302 | - | 3.A.1.26.9 |
| CAZyme | k141_43955 | k141_43955_15 | 12299 | 13072 | - | CE4 |
| CAZyme | k141_43955 | k141_43955_16 | 13187 | 14299 | - | CE9 |
| TC | k141_43955 | k141_43955_17 | 14683 | 16149 | - | 4.A.1.1.7 |
| TC | k141_43955 | k141_43955_18 | 16220 | 16717 | - | 4.A.1.2.2 |
Gene ID: k141_43955_3
Type: CAZyme
Location: 1306 - 3843 (+)
Type: CAZyme
Location: 1306 - 3843 (+)
Gene ID: k141_43955_4
Type: pfam
Location: 3892 - 4248 (-)
Type: pfam
Location: 3892 - 4248 (-)
Gene ID: k141_43955_5
Type: TC
Location: 4248 - 5264 (-)
Type: TC
Location: 4248 - 5264 (-)
Gene ID: k141_43955_6
Type: TC
Location: 5261 - 5725 (-)
Type: TC
Location: 5261 - 5725 (-)
Gene ID: k141_43955_7
Type: TC
Location: 5751 - 6167 (-)
Type: TC
Location: 5751 - 6167 (-)
Gene ID: k141_43955_8
Type: TC
Location: 6154 - 6777 (-)
Type: TC
Location: 6154 - 6777 (-)
Gene ID: k141_43955_9
Type: TF
Location: 6900 - 7433 (+)
Type: TF
Location: 6900 - 7433 (+)
Gene ID: k141_43955_10
Type: pfam
Location: 7434 - 8036 (-)
Type: pfam
Location: 7434 - 8036 (-)
Gene ID: k141_43955_11
Type: CAZyme
Location: 8094 - 8864 (-)
Type: CAZyme
Location: 8094 - 8864 (-)
Gene ID: k141_43955_12
Type: pfam
Location: 9031 - 11148 (-)
Type: pfam
Location: 9031 - 11148 (-)
Gene ID: k141_43955_13
Type: TC
Location: 11486 - 11845 (-)
Type: TC
Location: 11486 - 11845 (-)
Gene ID: k141_43955_14
Type: TC
Location: 11916 - 12302 (-)
Type: TC
Location: 11916 - 12302 (-)
Gene ID: k141_43955_15
Type: CAZyme
Location: 12299 - 13072 (-)
Type: CAZyme
Location: 12299 - 13072 (-)
Gene ID: k141_43955_16
Type: CAZyme
Location: 13187 - 14299 (-)
Type: CAZyme
Location: 13187 - 14299 (-)
Gene ID: k141_43955_17
Type: TC
Location: 14683 - 16149 (-)
Type: TC
Location: 14683 - 16149 (-)
Gene ID: k141_43955_18
Type: TC
Location: 16220 - 16717 (-)
Type: TC
Location: 16220 - 16717 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes amylophilus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_43955_6 | vegan > omnivore | 1.25957 | 0.00241 |
| k141_43955_8 | vegan > omnivore | 1.54201 | 0.00241 |
| k141_43955_15 | vegan > omnivore | 1.61492 | 0.00241 |
| k141_43955_16 | vegan > omnivore | 1.28011 | 0.00241 |