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Cluster: CGMR071978_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_8359 k141_8359_32 36666 37034 + 4.A.4.1.2
STP k141_8359 k141_8359_33 37305 38756 + CBS | CBS
TC k141_8359 k141_8359_34 38971 42648 + 2.A.6.3.6
pfam k141_8359 k141_8359_35 42809 43537 + PAP2_3
TC k141_8359 k141_8359_36 43543 44568 + 4.D.2.1.5
pfam k141_8359 k141_8359_37 44581 45192 + CDP-OH_P_transf
pfam k141_8359 k141_8359_38 45212 46078 + PS_Dcarbxylase
TC k141_8359 k141_8359_39 46209 47615 + 2.A.25.1.3
pfam k141_8359 k141_8359_40 47786 48496 + Peptidase_C39_2
pfam k141_8359 k141_8359_41 49069 49914 + PRD | PRD | CAT_RBD
TC k141_8359 k141_8359_42 50056 51939 + 4.A.1.2.11
CAZyme k141_8359 k141_8359_43 51961 53418 + GH1
TC k141_8359 k141_8359_44 53788 56412 + 4.A.2.1.17
Gene ID: k141_8359_32
Type: TC
Location: 36666 - 37034 (+)
Gene ID: k141_8359_33
Type: STP
Location: 37305 - 38756 (+)
Gene ID: k141_8359_34
Type: TC
Location: 38971 - 42648 (+)
Gene ID: k141_8359_35
Type: pfam
Location: 42809 - 43537 (+)
Gene ID: k141_8359_36
Type: TC
Location: 43543 - 44568 (+)
Gene ID: k141_8359_37
Type: pfam
Location: 44581 - 45192 (+)
Gene ID: k141_8359_38
Type: pfam
Location: 45212 - 46078 (+)
Gene ID: k141_8359_39
Type: TC
Location: 46209 - 47615 (+)
Gene ID: k141_8359_40
Type: pfam
Location: 47786 - 48496 (+)
Gene ID: k141_8359_41
Type: pfam
Location: 49069 - 49914 (+)
Gene ID: k141_8359_42
Type: TC
Location: 50056 - 51939 (+)
Gene ID: k141_8359_43
Type: CAZyme
Location: 51961 - 53418 (+)
Gene ID: k141_8359_44
Type: TC
Location: 53788 - 56412 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_8359_34 vegan > omnivore 1.23254 0.00241
k141_8359_38 vegan > omnivore 1.08095 0.00241

🧭 Explore Read Mapping of CGC

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