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Cluster: CGMR071949_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_173636 k141_173636_9 5758 6855 - CBM50
TC k141_173636 k141_173636_10 6906 8147 - 3.A.6.1.1
pfam k141_173636 k141_173636_11 8170 9477 - UPF0004 | TRAM | Radical_SAM
TC k141_173636 k141_173636_12 9641 12655 - 2.A.6.3.6
STP k141_173636 k141_173636_13 12719 13288 - TetR_N
pfam k141_173636 k141_173636_14 13466 13969 + Flavodoxin_1
TC k141_173636 k141_173636_15 14319 15857 - 2.A.68.1.2
TC k141_173636 k141_173636_16 16062 16670 - 9.B.158.1.1
TC k141_173636 k141_173636_17 16679 17371 - 2.A.122.1.7
TC k141_173636 k141_173636_18 17371 17727 - 1.E.14.1.3
Gene ID: k141_173636_9
Type: CAZyme
Location: 5758 - 6855 (-)
Gene ID: k141_173636_10
Type: TC
Location: 6906 - 8147 (-)
Gene ID: k141_173636_11
Type: pfam
Location: 8170 - 9477 (-)
Gene ID: k141_173636_12
Type: TC
Location: 9641 - 12655 (-)
Gene ID: k141_173636_13
Type: STP
Location: 12719 - 13288 (-)
Gene ID: k141_173636_14
Type: pfam
Location: 13466 - 13969 (+)
Gene ID: k141_173636_15
Type: TC
Location: 14319 - 15857 (-)
Gene ID: k141_173636_16
Type: TC
Location: 16062 - 16670 (-)
Gene ID: k141_173636_17
Type: TC
Location: 16679 - 17371 (-)
Gene ID: k141_173636_18
Type: TC
Location: 17371 - 17727 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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