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Cluster: CGMR071940_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_156432 k141_156432_42 41599 42594 - GT2
pfam k141_156432 k141_156432_43 42662 43576 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
pfam k141_156432 k141_156432_44 43704 44498 - LicD
CAZyme k141_156432 k141_156432_45 44510 45511 - CE4
CAZyme k141_156432 k141_156432_46 45501 46598 - GT4
CAZyme k141_156432 k141_156432_47 46608 47369 - GT111
pfam k141_156432 k141_156432_48 47504 48601 - GLF | NAD_binding_8
TC k141_156432 k141_156432_49 48601 49272 - 9.B.18.1.2
Gene ID: k141_156432_42
Type: CAZyme
Location: 41599 - 42594 (-)
Gene ID: k141_156432_43
Type: pfam
Location: 42662 - 43576 (-)
Gene ID: k141_156432_44
Type: pfam
Location: 43704 - 44498 (-)
Gene ID: k141_156432_45
Type: CAZyme
Location: 44510 - 45511 (-)
Gene ID: k141_156432_46
Type: CAZyme
Location: 45501 - 46598 (-)
Gene ID: k141_156432_47
Type: CAZyme
Location: 46608 - 47369 (-)
Gene ID: k141_156432_48
Type: pfam
Location: 47504 - 48601 (-)
Gene ID: k141_156432_49
Type: TC
Location: 48601 - 49272 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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