dbCAN Logo

Cluster: CGMR071936_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_183959 k141_183959_7 7271 9037 + 2.A.17.1.7
TC k141_183959 k141_183959_8 9175 10938 + 2.A.17.1.7
pfam k141_183959 k141_183959_9 10979 11443 + Thioredox_DsbH | Thioredoxin_2 | Thioredoxin_7
pfam k141_183959 k141_183959_10 11445 11948 + Thioredox_DsbH | Thioredoxin_2 | Thioredoxin_7
TC k141_183959 k141_183959_11 11945 13897 - 3.A.11.1.1
peptidase k141_183959 k141_183959_12 13998 14627 - C40.UPW
CAZyme k141_183959 k141_183959_13 14653 15783 - GT19
pfam k141_183959 k141_183959_14 15787 16554 - SurE
TC k141_183959 k141_183959_15 16749 18890 + 9.B.174.1.2
TC k141_183959 k141_183959_16 18897 20000 + 3.A.1.5.20
NULL(UNKNOWN) k141_183959 k141_183959_17 20039 20590 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_183959 k141_183959_18 20655 21524 + Endonuclease_NS
TC k141_183959 k141_183959_19 21569 22825 - 2.A.103.1.3
Gene ID: k141_183959_7
Type: TC
Location: 7271 - 9037 (+)
Gene ID: k141_183959_8
Type: TC
Location: 9175 - 10938 (+)
Gene ID: k141_183959_9
Type: pfam
Location: 10979 - 11443 (+)
Gene ID: k141_183959_10
Type: pfam
Location: 11445 - 11948 (+)
Gene ID: k141_183959_11
Type: TC
Location: 11945 - 13897 (-)
Gene ID: k141_183959_12
Type: peptidase
Location: 13998 - 14627 (-)
Gene ID: k141_183959_13
Type: CAZyme
Location: 14653 - 15783 (-)
Gene ID: k141_183959_14
Type: pfam
Location: 15787 - 16554 (-)
Gene ID: k141_183959_15
Type: TC
Location: 16749 - 18890 (+)
Gene ID: k141_183959_16
Type: TC
Location: 18897 - 20000 (+)
Gene ID: k141_183959_17
Type:
Location: 20039 - 20590 (-)
Gene ID: k141_183959_18
Type: pfam
Location: 20655 - 21524 (+)
Gene ID: k141_183959_19
Type: TC
Location: 21569 - 22825 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List