Cluster: CGMR071836_CGC5
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR071836
- CGC Family ID: CGCFAM_01823
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_19030 | k141_19030_2 | 205 | 2100 | - | GH13_4 |
| STP | k141_19030 | k141_19030_3 | 2097 | 3047 | - | PfkB |
| CAZyme | k141_19030 | k141_19030_4 | 3427 | 4752 | - | GH32 |
| TC | k141_19030 | k141_19030_5 | 4909 | 5769 | - | 3.A.1.1.28 |
| TC | k141_19030 | k141_19030_6 | 5769 | 6641 | - | 3.A.1.1.45 |
| STP | k141_19030 | k141_19030_7 | 6654 | 8030 | - | SBP_bac_1 |
| TF | k141_19030 | k141_19030_8 | 8321 | 9355 | + | LacI |
| CAZyme | k141_19030 | k141_19030_9 | 9465 | 11162 | - | GH13_31 |
| CAZyme | k141_19030 | k141_19030_10 | 11177 | 13360 | - | GH36 |
| TC | k141_19030 | k141_19030_11 | 13860 | 14993 | + | 3.A.1.1.26 |
Gene ID: k141_19030_2
Type: CAZyme
Location: 205 - 2100 (-)
Type: CAZyme
Location: 205 - 2100 (-)
Gene ID: k141_19030_3
Type: STP
Location: 2097 - 3047 (-)
Type: STP
Location: 2097 - 3047 (-)
Gene ID: k141_19030_4
Type: CAZyme
Location: 3427 - 4752 (-)
Type: CAZyme
Location: 3427 - 4752 (-)
Gene ID: k141_19030_5
Type: TC
Location: 4909 - 5769 (-)
Type: TC
Location: 4909 - 5769 (-)
Gene ID: k141_19030_6
Type: TC
Location: 5769 - 6641 (-)
Type: TC
Location: 5769 - 6641 (-)
Gene ID: k141_19030_7
Type: STP
Location: 6654 - 8030 (-)
Type: STP
Location: 6654 - 8030 (-)
Gene ID: k141_19030_8
Type: TF
Location: 8321 - 9355 (+)
Type: TF
Location: 8321 - 9355 (+)
Gene ID: k141_19030_9
Type: CAZyme
Location: 9465 - 11162 (-)
Type: CAZyme
Location: 9465 - 11162 (-)
Gene ID: k141_19030_10
Type: CAZyme
Location: 11177 - 13360 (-)
Type: CAZyme
Location: 11177 - 13360 (-)
Gene ID: k141_19030_11
Type: TC
Location: 13860 - 14993 (+)
Type: TC
Location: 13860 - 14993 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Intestinimonas
Species
Intestinimonas sp944385655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_19030_2 | vegan > omnivore | 1.67275 | 0.00455 |
| k141_19030_3 | vegan > omnivore | 1.63100 | 0.00455 |
| k141_19030_5 | vegan > omnivore | 2.10056 | 0.00455 |
| k141_19030_6 | vegan > omnivore | 1.81798 | 0.00455 |
| k141_19030_9 | vegan > omnivore | 1.36943 | 0.00455 |