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Cluster: CGMR071500_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_73407 k141_73407_96 107952 108290 - 4.A.3.1.2
TF k141_73407 k141_73407_97 108505 109509 - LacI
TC k141_73407 k141_73407_98 109867 111633 + 4.A.3.1.1
CAZyme k141_73407 k141_73407_99 111700 113139 + GH1
TF k141_73407 k141_73407_100 113407 114444 - LacI
CAZyme k141_73407 k141_73407_101 114786 116228 + GH1
TC k141_73407 k141_73407_102 116405 118165 + 4.A.3.1.1
TF k141_73407 k141_73407_103 118339 119349 - LacI
TC k141_73407 k141_73407_104 119625 121409 + 4.A.3.1.1
CAZyme k141_73407 k141_73407_105 121485 122906 + GH1
Gene ID: k141_73407_96
Type: TC
Location: 107952 - 108290 (-)
Gene ID: k141_73407_97
Type: TF
Location: 108505 - 109509 (-)
Gene ID: k141_73407_98
Type: TC
Location: 109867 - 111633 (+)
Gene ID: k141_73407_99
Type: CAZyme
Location: 111700 - 113139 (+)
Gene ID: k141_73407_100
Type: TF
Location: 113407 - 114444 (-)
Gene ID: k141_73407_101
Type: CAZyme
Location: 114786 - 116228 (+)
Gene ID: k141_73407_102
Type: TC
Location: 116405 - 118165 (+)
Gene ID: k141_73407_103
Type: TF
Location: 118339 - 119349 (-)
Gene ID: k141_73407_104
Type: TC
Location: 119625 - 121409 (+)
Gene ID: k141_73407_105
Type: CAZyme
Location: 121485 - 122906 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_73407_100 vegetarian > omnivore 1.06889 0.02242

🧭 Explore Read Mapping of CGC

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