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Cluster: CGMR071451_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_294882 k141_294882_23 19459 20331 + 2.A.64.3.2
TC k141_294882 k141_294882_24 20414 21709 - 2.A.40.7.6
pfam k141_294882 k141_294882_25 21808 22521 - DUF5020
CAZyme k141_294882 k141_294882_26 22686 24902 + GH92
pfam k141_294882 k141_294882_27 25104 25835 + NigD_C
TC k141_294882 k141_294882_28 26092 26685 - 2.A.95.1.4
pfam k141_294882 k141_294882_29 26898 27875 - PMI_typeI_cat | MPI_cupin_dom
CAZyme k141_294882 k141_294882_30 27887 29902 - GH13_8
TC k141_294882 k141_294882_31 30089 32410 + 2.A.37.4.1
Gene ID: k141_294882_23
Type: TC
Location: 19459 - 20331 (+)
Gene ID: k141_294882_24
Type: TC
Location: 20414 - 21709 (-)
Gene ID: k141_294882_25
Type: pfam
Location: 21808 - 22521 (-)
Gene ID: k141_294882_26
Type: CAZyme
Location: 22686 - 24902 (+)
Gene ID: k141_294882_27
Type: pfam
Location: 25104 - 25835 (+)
Gene ID: k141_294882_28
Type: TC
Location: 26092 - 26685 (-)
Gene ID: k141_294882_29
Type: pfam
Location: 26898 - 27875 (-)
Gene ID: k141_294882_30
Type: CAZyme
Location: 27887 - 29902 (-)
Gene ID: k141_294882_31
Type: TC
Location: 30089 - 32410 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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