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Cluster: CGMR071268_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_3812 k141_3812_127 139656 141071 - GH1
TC k141_3812 k141_3812_128 141115 142482 - 2.A.66.1.32
CAZyme k141_3812 k141_3812_129 142654 144660 + GH42
pfam k141_3812 k141_3812_130 144929 145192 + ATPase_gene1
NULL(UNKNOWN) k141_3812 k141_3812_131 145217 145654 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_3812 k141_3812_132 145694 146455 + 3.A.2.1.5
TC k141_3812 k141_3812_133 146555 146833 + 3.A.2.1.2
pfam k141_3812 k141_3812_134 146904 147407 + ATP-synt_B
pfam k141_3812 k141_3812_135 147404 147943 + OSCP
TC k141_3812 k141_3812_136 148009 149538 + 3.A.2.1.5
TC k141_3812 k141_3812_137 149562 150419 + 3.A.2.1.5
TC k141_3812 k141_3812_138 150442 151836 + 3.A.2.1.5
Gene ID: k141_3812_127
Type: CAZyme
Location: 139656 - 141071 (-)
Gene ID: k141_3812_128
Type: TC
Location: 141115 - 142482 (-)
Gene ID: k141_3812_129
Type: CAZyme
Location: 142654 - 144660 (+)
Gene ID: k141_3812_130
Type: pfam
Location: 144929 - 145192 (+)
Gene ID: k141_3812_131
Type:
Location: 145217 - 145654 (+)
Gene ID: k141_3812_132
Type: TC
Location: 145694 - 146455 (+)
Gene ID: k141_3812_133
Type: TC
Location: 146555 - 146833 (+)
Gene ID: k141_3812_134
Type: pfam
Location: 146904 - 147407 (+)
Gene ID: k141_3812_135
Type: pfam
Location: 147404 - 147943 (+)
Gene ID: k141_3812_136
Type: TC
Location: 148009 - 149538 (+)
Gene ID: k141_3812_137
Type: TC
Location: 149562 - 150419 (+)
Gene ID: k141_3812_138
Type: TC
Location: 150442 - 151836 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_3812_127 vegetarian > vegan 1.51353 0.04646
k141_3812_132 vegan > omnivore 1.14582 0.01054

🧭 Explore Read Mapping of CGC

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