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Cluster: CGMR071268_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_87112 k141_87112_16 13781 15460 + GH18
TC k141_87112 k141_87112_17 15791 17230 - 2.A.38.1.1
TC k141_87112 k141_87112_18 17245 18600 - 2.A.38.1.1
pfam k141_87112 k141_87112_19 18780 19694 + MS_channel_2nd | MS_channel_1st_1 | MS_channel_3rd
TC k141_87112 k141_87112_20 19828 20379 + 3.A.1.25.5
Gene ID: k141_87112_16
Type: CAZyme
Location: 13781 - 15460 (+)
Gene ID: k141_87112_17
Type: TC
Location: 15791 - 17230 (-)
Gene ID: k141_87112_18
Type: TC
Location: 17245 - 18600 (-)
Gene ID: k141_87112_19
Type: pfam
Location: 18780 - 19694 (+)
Gene ID: k141_87112_20
Type: TC
Location: 19828 - 20379 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_87112_17 vegan > omnivore 1.21678 0.01304
k141_87112_17 vegetarian > omnivore 1.29913 0.04598

🧭 Explore Read Mapping of CGC

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