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Cluster: CGMR071268_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_16835 k141_16835_5 4853 5611 + 9.B.34.1.3
CAZyme k141_16835 k141_16835_6 5673 6974 - GH32
STP k141_16835 k141_16835_7 6989 7225 - PTS-HPr
TC k141_16835 k141_16835_8 7240 8334 - 3.A.1.1.27
TC k141_16835 k141_16835_9 8341 9192 - 3.A.1.1.20
TC k141_16835 k141_16835_10 9164 10063 - 3.A.1.1.20
TC k141_16835 k141_16835_11 10063 11385 - 3.A.1.1.20
TF k141_16835 k141_16835_12 11679 12716 + LacI
TC k141_16835 k141_16835_13 12754 13494 - 3.A.1.3.20
TC k141_16835 k141_16835_14 13491 14285 - 3.A.1.3.20
TC k141_16835 k141_16835_15 14298 15149 - 3.A.1.3.20
Gene ID: k141_16835_5
Type: TC
Location: 4853 - 5611 (+)
Gene ID: k141_16835_6
Type: CAZyme
Location: 5673 - 6974 (-)
Gene ID: k141_16835_7
Type: STP
Location: 6989 - 7225 (-)
Gene ID: k141_16835_8
Type: TC
Location: 7240 - 8334 (-)
Gene ID: k141_16835_9
Type: TC
Location: 8341 - 9192 (-)
Gene ID: k141_16835_10
Type: TC
Location: 9164 - 10063 (-)
Gene ID: k141_16835_11
Type: TC
Location: 10063 - 11385 (-)
Gene ID: k141_16835_12
Type: TF
Location: 11679 - 12716 (+)
Gene ID: k141_16835_13
Type: TC
Location: 12754 - 13494 (-)
Gene ID: k141_16835_14
Type: TC
Location: 13491 - 14285 (-)
Gene ID: k141_16835_15
Type: TC
Location: 14298 - 15149 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_16835_5 vegan > omnivore 1.27431 0.03401

🧭 Explore Read Mapping of CGC

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