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Cluster: CGMR071268_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_95185 k141_95185_10 9560 11347 + 8.A.59.2.1
STP k141_95185 k141_95185_11 11344 12336 + Peripla_BP_1
TC k141_95185 k141_95185_12 12497 13474 + 3.A.1.2.11
TC k141_95185 k141_95185_13 13495 15009 + 3.A.1.2.20
TC k141_95185 k141_95185_14 15023 16003 + 3.A.1.2.11
TC k141_95185 k141_95185_15 16140 17255 + 3.A.1.2.20
pfam k141_95185 k141_95185_16 17549 18949 + FGGY_N | FGGY_C
pfam k141_95185 k141_95185_17 18992 20410 + Arabinose_Iso_C
TC k141_95185 k141_95185_18 20464 22284 - 8.A.59.2.1
TF k141_95185 k141_95185_19 22281 23837 - HTH_AraC | HTH_AraC
pfam k141_95185 k141_95185_20 23866 25017 - Glyphos_transf
CAZyme k141_95185 k141_95185_21 25019 27442 - GT4
TC k141_95185 k141_95185_22 27693 29198 + 3.A.1.2.20
TC k141_95185 k141_95185_23 29198 30193 + 3.A.1.2.9
TC k141_95185 k141_95185_24 30196 31203 + 3.A.1.2.11
TC k141_95185 k141_95185_25 31299 32327 + 3.A.1.2.9
Gene ID: k141_95185_10
Type: TC
Location: 9560 - 11347 (+)
Gene ID: k141_95185_11
Type: STP
Location: 11344 - 12336 (+)
Gene ID: k141_95185_12
Type: TC
Location: 12497 - 13474 (+)
Gene ID: k141_95185_13
Type: TC
Location: 13495 - 15009 (+)
Gene ID: k141_95185_14
Type: TC
Location: 15023 - 16003 (+)
Gene ID: k141_95185_15
Type: TC
Location: 16140 - 17255 (+)
Gene ID: k141_95185_16
Type: pfam
Location: 17549 - 18949 (+)
Gene ID: k141_95185_17
Type: pfam
Location: 18992 - 20410 (+)
Gene ID: k141_95185_18
Type: TC
Location: 20464 - 22284 (-)
Gene ID: k141_95185_19
Type: TF
Location: 22281 - 23837 (-)
Gene ID: k141_95185_20
Type: pfam
Location: 23866 - 25017 (-)
Gene ID: k141_95185_21
Type: CAZyme
Location: 25019 - 27442 (-)
Gene ID: k141_95185_22
Type: TC
Location: 27693 - 29198 (+)
Gene ID: k141_95185_23
Type: TC
Location: 29198 - 30193 (+)
Gene ID: k141_95185_24
Type: TC
Location: 30196 - 31203 (+)
Gene ID: k141_95185_25
Type: TC
Location: 31299 - 32327 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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