Cluster: CGMR071185_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR071185
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_407482 | k141_407482_8 | 8518 | 9558 | + | 3.A.1.11.1 |
| TC | k141_407482 | k141_407482_9 | 9558 | 10316 | + | 3.A.1.15.5 |
| TC | k141_407482 | k141_407482_10 | 10316 | 11155 | + | 3.A.1.15.13 |
| CAZyme | k141_407482 | k141_407482_11 | 11537 | 15397 | + | CBM32 | GH2 |
| pfam | k141_407482 | k141_407482_12 | 15571 | 17727 | + | Big_4 |
| TF | k141_407482 | k141_407482_13 | 18050 | 18901 | + | HTH_AraC |
| TC | k141_407482 | k141_407482_14 | 19138 | 20238 | - | 2.A.36.2.1 |
Gene ID: k141_407482_8
Type: TC
Location: 8518 - 9558 (+)
Type: TC
Location: 8518 - 9558 (+)
Gene ID: k141_407482_9
Type: TC
Location: 9558 - 10316 (+)
Type: TC
Location: 9558 - 10316 (+)
Gene ID: k141_407482_10
Type: TC
Location: 10316 - 11155 (+)
Type: TC
Location: 10316 - 11155 (+)
Gene ID: k141_407482_11
Type: CAZyme
Location: 11537 - 15397 (+)
Type: CAZyme
Location: 11537 - 15397 (+)
Gene ID: k141_407482_12
Type: pfam
Location: 15571 - 17727 (+)
Type: pfam
Location: 15571 - 17727 (+)
Gene ID: k141_407482_13
Type: TF
Location: 18050 - 18901 (+)
Type: TF
Location: 18050 - 18901 (+)
Gene ID: k141_407482_14
Type: TC
Location: 19138 - 20238 (-)
Type: TC
Location: 19138 - 20238 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Howiella
Species
Howiella sp900543525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.