Cluster: CGMR071185_CGC12
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR071185
- CGC Family ID: CGCFAM_00005
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_231743 | k141_231743_5 | 4608 | 5543 | + | 3.A.11.1.4 |
| TF | k141_231743 | k141_231743_6 | 5948 | 6487 | - | SpoVT_AbrB |
| STP | k141_231743 | k141_231743_7 | 6909 | 7589 | + | PIG-L |
| TC | k141_231743 | k141_231743_8 | 7614 | 8285 | + | 9.B.18.1.1 |
| pfam | k141_231743 | k141_231743_9 | 8282 | 8989 | + | WbqC |
| NULL(UNKNOWN) | k141_231743 | k141_231743_10 | 8976 | 9944 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_231743 | k141_231743_11 | 9941 | 11077 | + | GT4 |
| CAZyme | k141_231743 | k141_231743_12 | 11056 | 11451 | + | GT2 |
Gene ID: k141_231743_5
Type: TC
Location: 4608 - 5543 (+)
Type: TC
Location: 4608 - 5543 (+)
Gene ID: k141_231743_6
Type: TF
Location: 5948 - 6487 (-)
Type: TF
Location: 5948 - 6487 (-)
Gene ID: k141_231743_7
Type: STP
Location: 6909 - 7589 (+)
Type: STP
Location: 6909 - 7589 (+)
Gene ID: k141_231743_8
Type: TC
Location: 7614 - 8285 (+)
Type: TC
Location: 7614 - 8285 (+)
Gene ID: k141_231743_9
Type: pfam
Location: 8282 - 8989 (+)
Type: pfam
Location: 8282 - 8989 (+)
Gene ID: k141_231743_10
Type:
Location: 8976 - 9944 (+)
Type:
Location: 8976 - 9944 (+)
Gene ID: k141_231743_11
Type: CAZyme
Location: 9941 - 11077 (+)
Type: CAZyme
Location: 9941 - 11077 (+)
Gene ID: k141_231743_12
Type: CAZyme
Location: 11056 - 11451 (+)
Type: CAZyme
Location: 11056 - 11451 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Howiella
Species
Howiella sp900543525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.