Cluster: CGMR071084_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: CGMR071084
- CGC Family ID: CGCFAM_00160
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_8219 | k141_8219_4 | 5955 | 6959 | + | GT2 |
| TF | k141_8219 | k141_8219_5 | 6975 | 7709 | - | GntR |
| TC | k141_8219 | k141_8219_6 | 7971 | 9926 | + | 4.A.1.2.13 |
| CAZyme | k141_8219 | k141_8219_7 | 10055 | 11716 | + | GH13_29 |
| TC | k141_8219 | k141_8219_8 | 11879 | 13231 | + | 2.A.66.1.25 |
Gene ID: k141_8219_4
Type: CAZyme
Location: 5955 - 6959 (+)
Type: CAZyme
Location: 5955 - 6959 (+)
Gene ID: k141_8219_5
Type: TF
Location: 6975 - 7709 (-)
Type: TF
Location: 6975 - 7709 (-)
Gene ID: k141_8219_6
Type: TC
Location: 7971 - 9926 (+)
Type: TC
Location: 7971 - 9926 (+)
Gene ID: k141_8219_7
Type: CAZyme
Location: 10055 - 11716 (+)
Type: CAZyme
Location: 10055 - 11716 (+)
Gene ID: k141_8219_8
Type: TC
Location: 11879 - 13231 (+)
Type: TC
Location: 11879 - 13231 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.