Cluster: CGMR071084_CGC37
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR071084
- CGC Family ID: CGCFAM_00963
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_6841 | k141_6841_67 | 76866 | 78137 | - | GT4 |
| CAZyme | k141_6841 | k141_6841_68 | 78142 | 79167 | - | GT2 |
| pfam | k141_6841 | k141_6841_69 | 79204 | 80598 | - | PS_pyruv_trans |
| CAZyme | k141_6841 | k141_6841_70 | 80600 | 83275 | - | GT2 |
| TC | k141_6841 | k141_6841_71 | 83308 | 84054 | - | 3.A.1.103.5 |
| TC | k141_6841 | k141_6841_72 | 84074 | 84877 | - | 3.A.1.103.6 |
| pfam | k141_6841 | k141_6841_73 | 84958 | 86790 | - | DUF6020 |
| CAZyme | k141_6841 | k141_6841_74 | 86952 | 91637 | - | CBM13 | CBM13 | CBM13 | CBM13 | CBM13 | CBM13 | GH73 |
Gene ID: k141_6841_67
Type: CAZyme
Location: 76866 - 78137 (-)
Type: CAZyme
Location: 76866 - 78137 (-)
Gene ID: k141_6841_68
Type: CAZyme
Location: 78142 - 79167 (-)
Type: CAZyme
Location: 78142 - 79167 (-)
Gene ID: k141_6841_69
Type: pfam
Location: 79204 - 80598 (-)
Type: pfam
Location: 79204 - 80598 (-)
Gene ID: k141_6841_70
Type: CAZyme
Location: 80600 - 83275 (-)
Type: CAZyme
Location: 80600 - 83275 (-)
Gene ID: k141_6841_71
Type: TC
Location: 83308 - 84054 (-)
Type: TC
Location: 83308 - 84054 (-)
Gene ID: k141_6841_72
Type: TC
Location: 84074 - 84877 (-)
Type: TC
Location: 84074 - 84877 (-)
Gene ID: k141_6841_73
Type: pfam
Location: 84958 - 86790 (-)
Type: pfam
Location: 84958 - 86790 (-)
Gene ID: k141_6841_74
Type: CAZyme
Location: 86952 - 91637 (-)
Type: CAZyme
Location: 86952 - 91637 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.