Cluster: CGMR071084_CGC34
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR071084
- CGC Family ID: CGCFAM_05420
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_2942 | k141_2942_265 | 278646 | 279884 | - | 1.A.11.5.1 |
| pfam | k141_2942 | k141_2942_266 | 280131 | 281198 | - | CbiG_C | CbiG_N | CbiG_mid |
| TF | k141_2942 | k141_2942_267 | 281214 | 281672 | - | HTH_11 |
| TC | k141_2942 | k141_2942_268 | 281906 | 283240 | + | 2.A.66.1.33 |
| CAZyme | k141_2942 | k141_2942_269 | 283329 | 284447 | - | GH18 |
| TC | k141_2942 | k141_2942_270 | 284644 | 286518 | - | 3.A.1.135.9 |
| TC | k141_2942 | k141_2942_271 | 286511 | 288289 | - | 3.A.1.135.9 |
Gene ID: k141_2942_265
Type: TC
Location: 278646 - 279884 (-)
Type: TC
Location: 278646 - 279884 (-)
Gene ID: k141_2942_266
Type: pfam
Location: 280131 - 281198 (-)
Type: pfam
Location: 280131 - 281198 (-)
Gene ID: k141_2942_267
Type: TF
Location: 281214 - 281672 (-)
Type: TF
Location: 281214 - 281672 (-)
Gene ID: k141_2942_268
Type: TC
Location: 281906 - 283240 (+)
Type: TC
Location: 281906 - 283240 (+)
Gene ID: k141_2942_269
Type: CAZyme
Location: 283329 - 284447 (-)
Type: CAZyme
Location: 283329 - 284447 (-)
Gene ID: k141_2942_270
Type: TC
Location: 284644 - 286518 (-)
Type: TC
Location: 284644 - 286518 (-)
Gene ID: k141_2942_271
Type: TC
Location: 286511 - 288289 (-)
Type: TC
Location: 286511 - 288289 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.