Cluster: CGMR071084_CGC13
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR071084
- CGC Family ID: CGCFAM_00506
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_8067 | k141_8067_10 | 6071 | 7510 | - | GH43_35 |
| CAZyme | k141_8067 | k141_8067_11 | 7773 | 9206 | + | GH13_20 |
| pfam | k141_8067 | k141_8067_12 | 9326 | 9832 | - | Flavin_Reduct |
| pfam | k141_8067 | k141_8067_13 | 9871 | 11094 | - | tRNA-synt_1b | S4 | SYY_C-terminal |
| TC | k141_8067 | k141_8067_14 | 11499 | 12254 | - | 9.B.158.1.1 |
| TC | k141_8067 | k141_8067_15 | 12396 | 13865 | - | 4.A.1.1.7 |
| TC | k141_8067 | k141_8067_16 | 13946 | 14428 | - | 4.A.1.2.11 |
| pfam | k141_8067 | k141_8067_17 | 14437 | 15273 | - | PRD | PRD | CAT_RBD |
| CAZyme | k141_8067 | k141_8067_18 | 15474 | 16589 | - | CE9 |
| sulfatase | k141_8067 | k141_8067_19 | 16611 | 17342 | - | S1_9 |
| pfam | k141_8067 | k141_8067_20 | 17692 | 18456 | - | PseudoU_synth_1 | PseudoU_synth_1 |
| TC | k141_8067 | k141_8067_21 | 18468 | 19292 | - | 3.A.1.26.7 |
| TC | k141_8067 | k141_8067_22 | 19285 | 20133 | - | 3.A.1.26.7 |
| TC | k141_8067 | k141_8067_23 | 20118 | 20969 | - | 3.A.1.26.7 |
Gene ID: k141_8067_10
Type: CAZyme
Location: 6071 - 7510 (-)
Type: CAZyme
Location: 6071 - 7510 (-)
Gene ID: k141_8067_11
Type: CAZyme
Location: 7773 - 9206 (+)
Type: CAZyme
Location: 7773 - 9206 (+)
Gene ID: k141_8067_12
Type: pfam
Location: 9326 - 9832 (-)
Type: pfam
Location: 9326 - 9832 (-)
Gene ID: k141_8067_13
Type: pfam
Location: 9871 - 11094 (-)
Type: pfam
Location: 9871 - 11094 (-)
Gene ID: k141_8067_14
Type: TC
Location: 11499 - 12254 (-)
Type: TC
Location: 11499 - 12254 (-)
Gene ID: k141_8067_15
Type: TC
Location: 12396 - 13865 (-)
Type: TC
Location: 12396 - 13865 (-)
Gene ID: k141_8067_16
Type: TC
Location: 13946 - 14428 (-)
Type: TC
Location: 13946 - 14428 (-)
Gene ID: k141_8067_17
Type: pfam
Location: 14437 - 15273 (-)
Type: pfam
Location: 14437 - 15273 (-)
Gene ID: k141_8067_18
Type: CAZyme
Location: 15474 - 16589 (-)
Type: CAZyme
Location: 15474 - 16589 (-)
Gene ID: k141_8067_19
Type: sulfatase
Location: 16611 - 17342 (-)
Type: sulfatase
Location: 16611 - 17342 (-)
Gene ID: k141_8067_20
Type: pfam
Location: 17692 - 18456 (-)
Type: pfam
Location: 17692 - 18456 (-)
Gene ID: k141_8067_21
Type: TC
Location: 18468 - 19292 (-)
Type: TC
Location: 18468 - 19292 (-)
Gene ID: k141_8067_22
Type: TC
Location: 19285 - 20133 (-)
Type: TC
Location: 19285 - 20133 (-)
Gene ID: k141_8067_23
Type: TC
Location: 20118 - 20969 (-)
Type: TC
Location: 20118 - 20969 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.